Mercurial > repos > galaxyp > openms_ptmodel

diff PTModel.xml @ 1:30ccca244091 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 9a14ed1f2d3c9abdfb080251b3419dd9e0c52a14
author galaxyp
date Wed, 09 Aug 2017 09:21:36 -0400
parents 2b34b435c177
children a174f62788b7
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line diff
--- a/PTModel.xml	Wed Mar 01 12:34:29 2017 -0500
+++ b/PTModel.xml	Wed Aug 09 09:21:36 2017 -0400
@@ -1,7 +1,7 @@
 <?xml version='1.0' encoding='UTF-8'?>
 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
 <!--Proposed Tool Section: [Peptide property prediction]-->
-<tool id="PTModel" name="PTModel" version="2.1.0">
+<tool id="PTModel" name="PTModel" version="2.2.0">
   <description>Trains a model for the prediction of proteotypic peptides from a training set.</description>
   <macros>
     <token name="@EXECUTABLE@">PTModel</token>
@@ -25,13 +25,23 @@
   -c $param_c
 #end if
 #if $param_svm_type:
-  -svm_type $param_svm_type
+  -svm_type
+  #if " " in str($param_svm_type):
+    "$param_svm_type"
+  #else
+    $param_svm_type
+  #end if
 #end if
 #if $param_nu:
   -nu $param_nu
 #end if
 #if $param_kernel_type:
-  -kernel_type $param_kernel_type
+  -kernel_type
+  #if " " in str($param_kernel_type):
+    "$param_kernel_type"
+  #else
+    $param_kernel_type
+  #end if
 #end if
 #if $param_degree:
   -degree $param_degree