diff QCCalculator.xml @ 7:1fc9e74f040c draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Fri, 17 May 2019 04:54:51 -0400
parents 988cd0f185ee
children 8bcc0d2ad96e
line wrap: on
line diff
--- a/QCCalculator.xml	Tue Mar 20 15:16:16 2018 -0400
+++ b/QCCalculator.xml	Fri May 17 04:54:51 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>QCCalculator
+  <command detect_errors="aggressive"><![CDATA[QCCalculator
 
 #if $param_in:
   -in $param_in
@@ -35,7 +35,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="mzml" optional="False" label="raw data input file (this is relevant if you want to look at MS1, MS2 and precursor peak information)" help="(-in) "/>
     <param name="param_id" type="data" format="idxml" optional="True" label="Input idXML file containing the identifications" help="(-id) Your identifications will be exported in an easy-to-read format"/>
@@ -52,5 +52,5 @@
   <help>Calculates basic quality parameters from MS experiments and subsequent analysis data as identification or feature detection.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCCalculator.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_QCCalculator.html</help>
 </tool>