Mercurial > repos > galaxyp > openms_qcexporter

comparison QCExporter.xml @ 11:adf7f5301284 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 19:54:47 +0000
parents 7e8a254ef96d
children 838b8e375587
comparison
equal deleted inserted replaced
10:bd8735ccc6f6 11:adf7f5301284
50 <expand macro="list_string_val"/> 50 <expand macro="list_string_val"/>
51 <expand macro="list_string_san"/> 51 <expand macro="list_string_san"/>
52 </param> 52 </param>
53 <param name="mapping" argument="-mapping" type="data" format="csv" optional="false" label="The mapping of the exported table's headers to the according qp cvs" help="The first row is considered containing the headers as for the exported the table. The second row is considered the according qp cv accessions of the qp to be exported select csv data sets(s)"/> 53 <param name="mapping" argument="-mapping" type="data" format="csv" optional="false" label="The mapping of the exported table's headers to the according qp cvs" help="The first row is considered containing the headers as for the exported the table. The second row is considered the according qp cv accessions of the qp to be exported select csv data sets(s)"/>
54 <expand macro="adv_opts_macro"> 54 <expand macro="adv_opts_macro">
55 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 55 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
56 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 56 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
57 <expand macro="list_string_san"/> 57 <expand macro="list_string_san"/>
58 </param> 58 </param>
59 </expand> 59 </expand>
60 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> 60 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
61 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 61 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
62 </param> 62 </param>
63 </inputs> 63 </inputs>
64 <outputs> 64 <outputs>
65 <data name="out_csv" label="${tool.name} on ${on_string}: out_csv" format="csv"/> 65 <data name="out_csv" label="${tool.name} on ${on_string}: out_csv" format="csv"/>
72 <expand macro="manutest_QCExporter"/> 72 <expand macro="manutest_QCExporter"/>
73 </tests> 73 </tests>
74 <help><![CDATA[Will extract several qp from several run/sets in a tabular format. 74 <help><![CDATA[Will extract several qp from several run/sets in a tabular format.
75 75
76 76
77 For more information, visit http://www.openms.de/documentation/UTILS_QCExporter.html]]></help> 77 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/UTILS_QCExporter.html]]></help>
78 <expand macro="references"/> 78 <expand macro="references"/>
79 </tool> 79 </tool>