Mercurial > repos > galaxyp > openms_qcexporter

comparison QCExporter.xml @ 7:bb52c480a74a draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Fri, 17 May 2019 04:49:51 -0400
parents aa28cebc18fc
children 7e8a254ef96d
comparison
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6:a56aaea020b6 7:bb52c480a74a
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
10 <expand macro="references"/> 10 <expand macro="references"/>
11 <expand macro="stdio"/> 11 <expand macro="stdio"/>
12 <expand macro="requirements"/> 12 <expand macro="requirements"/>
13 <command>QCExporter 13 <command detect_errors="aggressive"><![CDATA[QCExporter
14 14
15 #if $param_in: 15 #if $param_in:
16 -in $param_in 16 -in $param_in
17 #end if 17 #end if
18 18
35 #if $adv_opts.adv_opts_selector=='advanced': 35 #if $adv_opts.adv_opts_selector=='advanced':
36 #if $adv_opts.param_force: 36 #if $adv_opts.param_force:
37 -force 37 -force
38 #end if 38 #end if
39 #end if 39 #end if
40 </command> 40 ]]></command>
41 <inputs> 41 <inputs>
42 <param name="param_in" type="data" format="qcml" optional="False" label="Input qcml file" help="(-in) "/> 42 <param name="param_in" type="data" format="qcml" optional="False" label="Input qcml file" help="(-in) "/>
43 <repeat name="rep_param_names" min="0" title="param_names"> 43 <repeat name="rep_param_names" min="0" title="param_names">
44 <param name="param_names" type="text" size="30" label="The name of the target runs or sets to be exported from" help="(-names) If empty, from all will be exported"> 44 <param name="param_names" type="text" size="30" label="The name of the target runs or sets to be exported from" help="(-names) If empty, from all will be exported">
45 <sanitizer> 45 <sanitizer>
59 <data name="param_out_csv" format="tabular"/> 59 <data name="param_out_csv" format="tabular"/>
60 </outputs> 60 </outputs>
61 <help>Will extract several qp from several run/sets in a tabular format. 61 <help>Will extract several qp from several run/sets in a tabular format.
62 62
63 63
64 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCExporter.html</help> 64 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_QCExporter.html</help>
65 </tool> 65 </tool>