--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/QCImporter.xml	Wed Mar 01 13:00:01 2017 -0500
@@ -0,0 +1,48 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
+<!--Proposed Tool Section: [Utilities]-->
+<tool id="QCImporter" name="QCImporter" version="2.1.0">
+  <description>Imports tables with quality control parameters into qcml files.</description>
+  <macros>
+    <token name="@EXECUTABLE@">QCImporter</token>
+    <import>macros.xml</import>
+  </macros>
+  <expand macro="references"/>
+  <expand macro="stdio"/>
+  <expand macro="requirements"/>
+  <command>QCImporter
+
+#if $param_in:
+  -in $param_in
+#end if
+#if $param_table:
+  -table $param_table
+#end if
+#if $param_mapping:
+  -mapping $param_mapping
+#end if
+#if $param_out:
+  -out $param_out
+#end if
+#if $adv_opts.adv_opts_selector=='advanced':
+    #if $adv_opts.param_force:
+  -force
+#end if
+#end if
+</command>
+  <inputs>
+    <param name="param_in" type="data" format="qcml" optional="True" label="Input qcml file" help="(-in) "/>
+    <param name="param_table" type="data" format="tabular" optional="False" label="The table containing the additional qp values in the columns" help="(-table) First row is considered containing the header. The target run or set names/ids are indicated by column &quot;raw data file&quot;, so each row after the header will contain the values of qps for that run. (csv without &quot;!)"/>
+    <param name="param_mapping" type="data" format="tabular" optional="False" label="The mapping of the table header to the according qp cvs, also in csv format" help="(-mapping) The first row is considered containing the headers as in the table. The second row is considered the according qp cv accessions. (csv without &quot;!)"/>
+    <expand macro="advanced_options">
+      <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
+    </expand>
+  </inputs>
+  <outputs>
+    <data name="param_out" format="qcml"/>
+  </outputs>
+  <help>Imports tables with quality control parameters into qcml files.
+
+
+For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCImporter.html</help>
+</tool>