Mercurial > repos > galaxyp > openms_qcshrinker

comparison QCShrinker.xml @ 7:52720a19f8f1 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 08:06:32 -0400
parents b186ae098994
children ccfc3e189087
comparison
equal deleted inserted replaced
6:21d045f5985f 7:52720a19f8f1
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
10 <expand macro="references"/> 10 <expand macro="references"/>
11 <expand macro="stdio"/> 11 <expand macro="stdio"/>
12 <expand macro="requirements"/> 12 <expand macro="requirements"/>
13 <command>QCShrinker 13 <command detect_errors="aggressive"><![CDATA[QCShrinker
14 14
15 #if $param_in: 15 #if $param_in:
16 -in $param_in 16 -in $param_in
17 #end if 17 #end if
18 18
38 #if $adv_opts.adv_opts_selector=='advanced': 38 #if $adv_opts.adv_opts_selector=='advanced':
39 #if $adv_opts.param_force: 39 #if $adv_opts.param_force:
40 -force 40 -force
41 #end if 41 #end if
42 #end if 42 #end if
43 </command> 43 ]]></command>
44 <inputs> 44 <inputs>
45 <param name="param_in" type="data" format="qcml" optional="False" label="Input qcml file" help="(-in) "/> 45 <param name="param_in" type="data" format="qcml" optional="False" label="Input qcml file" help="(-in) "/>
46 <repeat name="rep_param_qp_accessions" min="0" title="param_qp_accessions"> 46 <repeat name="rep_param_qp_accessions" min="0" title="param_qp_accessions">
47 <param name="param_qp_accessions" type="text" size="30" label="A list of cv accessions that should be removed" help="(-qp_accessions) If empty, the usual suspects will be removed!"> 47 <param name="param_qp_accessions" type="text" size="30" label="A list of cv accessions that should be removed" help="(-qp_accessions) If empty, the usual suspects will be removed!">
48 <sanitizer> 48 <sanitizer>
70 <data name="param_out" format="qcml"/> 70 <data name="param_out" format="qcml"/>
71 </outputs> 71 </outputs>
72 <help>This application is used to remove the verbose table attachments from a qcml file that are not needed anymore, e.g. for a final report. 72 <help>This application is used to remove the verbose table attachments from a qcml file that are not needed anymore, e.g. for a final report.
73 73
74 74
75 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCShrinker.html</help> 75 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_QCShrinker.html</help>
76 </tool> 76 </tool>