--- a/QCShrinker.xml	Fri Nov 06 20:08:15 2020 +0000
+++ b/QCShrinker.xml	Thu Dec 01 19:25:13 2022 +0000
@@ -1,13 +1,11 @@
 <?xml version='1.0' encoding='UTF-8'?>
 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
 <!--Proposed Tool Section: [Utilities]-->
-<tool id="QCShrinker" name="QCShrinker" version="@TOOL_VERSION@+galaxy@GALAXY_VERSION@" profile="20.05">
+<tool id="QCShrinker" name="QCShrinker" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="21.05">
   <description>This application is used to remove the verbose table attachments from a qcml file that are not needed anymore, e.g. for a final report.</description>
   <macros>
     <token name="@EXECUTABLE@">QCShrinker</token>
     <import>macros.xml</import>
-    <import>macros_autotest.xml</import>
-    <import>macros_test.xml</import>
   </macros>
   <expand macro="requirements"/>
   <expand macro="stdio"/>
@@ -49,19 +47,19 @@
     <configfile name="hardcoded_json"><![CDATA[{"log": "log.txt", "threads": "\${GALAXY_SLOTS:-1}", "no_progress": true}]]></configfile>
   </configfiles>
   <inputs>
-    <param name="in" argument="-in" type="data" format="qcml" optional="false" label="Input qcml file" help=" select qcml data sets(s)"/>
-    <param name="qp_accessions" argument="-qp_accessions" type="text" optional="true" value="" label="A list of cv accessions that should be removed" help="If empty, the usual suspects will be removed! (space separated list, in order to allow for spaces in list items surround them by single quotes)">
-      <expand macro="list_string_val"/>
-      <expand macro="list_string_san"/>
+    <param argument="-in" type="data" format="qcml" optional="false" label="Input qcml file" help=" select qcml data sets(s)"/>
+    <param argument="-qp_accessions" type="text" optional="true" value="" label="A list of cv accessions that should be removed" help="If empty, the usual suspects will be removed! (space separated list, in order to allow for spaces in list items surround them by single quotes)">
+      <expand macro="list_string_val" name="qp_accessions"/>
+      <expand macro="list_string_san" name="qp_accessions"/>
     </param>
-    <param name="name" argument="-name" type="text" optional="true" value="" label="The name of the target run or set that contains the requested quality paramete" help="">
-      <expand macro="list_string_san"/>
+    <param argument="-name" type="text" optional="true" value="" label="The name of the target run or set that contains the requested quality paramete" help="">
+      <expand macro="list_string_san" name="name"/>
     </param>
-    <param name="run" argument="-run" type="data" format="mzml" optional="true" label="The file from which the name of the target run that contains the requested quality parameter is taken" help="This overrides the name parameter! select mzml data sets(s)"/>
+    <param argument="-run" type="data" format="mzml" optional="true" label="The file from which the name of the target run that contains the requested quality parameter is taken" help="This overrides the name parameter! select mzml data sets(s)"/>
     <expand macro="adv_opts_macro">
-      <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
-      <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
-        <expand macro="list_string_san"/>
+      <param argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
+      <param argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
+        <expand macro="list_string_san" name="test"/>
       </param>
     </expand>
     <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
@@ -74,13 +72,15 @@
       <filter>OPTIONAL_OUTPUTS is not None and "ctd_out_FLAG" in OPTIONAL_OUTPUTS</filter>
     </data>
   </outputs>
-  <tests>
-    <expand macro="autotest_QCShrinker"/>
-    <expand macro="manutest_QCShrinker"/>
-  </tests>
+  <tests><test expect_num_outputs="1"><!-- just using an output of QCCalculator as input  -->
+    <param name="adv_opts|test" value="true"/>
+    <param name="in" ftype="qcml" value="QCCalculator1.qcML"/>
+    <output name="out" ftype="qcml" value="QCShrinker.qcML"/>
+  </test>
+</tests>
   <help><![CDATA[This application is used to remove the verbose table attachments from a qcml file that are not needed anymore, e.g. for a final report.
 
 
-For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/UTILS_QCShrinker.html]]></help>
+For more information, visit http://www.openms.de/doxygen/release/2.8.0/html/UTILS_QCShrinker.html]]></help>
   <expand macro="references"/>
 </tool>