--- a/RNAMassCalculator.xml	Thu Sep 24 12:26:30 2020 +0000
+++ b/RNAMassCalculator.xml	Tue Oct 13 20:14:33 2020 +0000
@@ -2,7 +2,7 @@
 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
 <!--Proposed Tool Section: [Utilities]-->
 <tool id="RNAMassCalculator" name="RNAMassCalculator" version="@TOOL_VERSION@+galaxy@GALAXY_VERSION@" profile="20.05">
-  <description>Calculates masses and mass-to-charge ratios of RNA sequences</description>
+  <description>Calculates masses, mass-to-charge ratios and sum formulas of RNA sequences</description>
   <macros>
     <token name="@EXECUTABLE@">RNAMassCalculator</token>
     <import>macros.xml</import>
@@ -62,11 +62,12 @@
     <param name="charge" argument="-charge" type="text" optional="true" value="0" label="List of charge states; required if 'in_seq' is given" help=" (space separated list, in order to allow for spaces in list items surround them by single quotes)">
       <expand macro="list_integer_valsan"/>
     </param>
-    <param name="format" argument="-format" display="radio" type="select" optional="false" label="Output format ('list': human-readable list, 'table': CSV-like table, 'mass_only': mass values only, 'mz_only': m/z values only)" help="">
+    <param name="format" argument="-format" type="select" optional="false" label="Output format ('list': human-readable list, 'table': CSV-like table, 'mass_only': mass values only, 'mz_only': m/z values only, 'formula_only': sum formula only)" help="">
       <option value="list" selected="true">list</option>
       <option value="table">table</option>
       <option value="mass_only">mass_only</option>
       <option value="mz_only">mz_only</option>
+      <option value="formula_only">formula_only</option>
       <expand macro="list_string_san"/>
     </param>
     <param name="average_mass" argument="-average_mass" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Compute average (instead of monoisotopic) oligonucleotide masses" help=""/>
@@ -90,13 +91,13 @@
       <expand macro="list_string_san"/>
     </param>
     <expand macro="adv_opts_macro">
-      <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/>
+      <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
       <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
         <expand macro="list_string_san"/>
       </param>
     </expand>
-    <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="false">
-      <option value="out_FLAG">out (Enables the test mode (needed for internal use only))</option>
+    <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
+      <option value="out_FLAG">out (Output file; if empty, output is written to the screen)</option>
       <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
     </param>
   </inputs>
@@ -115,9 +116,9 @@
     <expand macro="autotest_RNAMassCalculator"/>
     <expand macro="manutest_RNAMassCalculator"/>
   </tests>
-  <help><![CDATA[Calculates masses and mass-to-charge ratios of RNA sequences
+  <help><![CDATA[Calculates masses, mass-to-charge ratios and sum formulas of RNA sequences
 
 
-For more information, visit http://www.openms.de/documentation/UTILS_RNAMassCalculator.html]]></help>
+For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/UTILS_RNAMassCalculator.html]]></help>
   <expand macro="references"/>
 </tool>