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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:15:37 +0000
parents a9ece00a3e54
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# seems not possible for 2.5 https://github.com/OpenMS/OpenMS/issues/4426
# DigestorMotif

# deprecated https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/latest/html/UTILS_IDDecoyProbability.html
# https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/latest/html/a16242.html
IDDecoyProbability

# personal communication with author V. Bafna: 
# "InsPect is no longer maintained as there are many better tools including MS-GF+"
InspectAdapter

# licence? see https://github.com/bioconda/bioconda-recipes/issues/18953
#MSFraggerAdapter

# https://github.com/OpenMS/OpenMS/issues/4550#issuecomment-594065727
ProteomicsLFQ

# https://github.com/OpenMS/OpenMS/issues/4401
InclusionExclusionListCreator
RTPredict
PTPredict