diff SeedListGenerator.xml @ 5:f840d8e8099a draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:39:37 +0000
parents bff2e0548994
children f3c72f54b9eb
line wrap: on
line diff
--- a/SeedListGenerator.xml	Wed Sep 23 15:05:05 2020 +0000
+++ b/SeedListGenerator.xml	Tue Oct 13 20:39:37 2020 +0000
@@ -44,12 +44,12 @@
     <param name="in" argument="-in" type="data" format="featurexml,idxml,mzml" optional="false" label="Input file (see below for details)" help=" select featurexml,idxml,mzml data sets(s)"/>
     <param name="use_peptide_mass" argument="-use_peptide_mass" type="boolean" truevalue="true" falsevalue="false" checked="false" label="[idXML input only] Use the monoisotopic mass of the best peptide hit for the m/z position (default: use precursor m/z)" help=""/>
     <expand macro="adv_opts_macro">
-      <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/>
+      <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
       <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
         <expand macro="list_string_san"/>
       </param>
     </expand>
-    <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true">
+    <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
       <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
     </param>
   </inputs>
@@ -66,6 +66,6 @@
   <help><![CDATA[Generates seed lists for feature detection.
 
 
-For more information, visit http://www.openms.de/documentation/TOPP_SeedListGenerator.html]]></help>
+For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_SeedListGenerator.html]]></help>
   <expand macro="references"/>
 </tool>