Mercurial > repos > galaxyp > openms_spectrafilternlargest

comparison SpectraFilterNLargest.xml @ 11:94e8fba2995e draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 20:16:20 +0000
parents 05a7ffa3f655
children 948d3b4988e4
comparison
equal deleted inserted replaced
10:2f1ead9c86e0 11:94e8fba2995e
44 <param name="in" argument="-in" type="data" format="mzml" optional="false" label="input file" help=" select mzml data sets(s)"/> 44 <param name="in" argument="-in" type="data" format="mzml" optional="false" label="input file" help=" select mzml data sets(s)"/>
45 <section name="algorithm" title="Algorithm parameter subsection" help="" expanded="false"> 45 <section name="algorithm" title="Algorithm parameter subsection" help="" expanded="false">
46 <param name="n" argument="-algorithm:n" type="integer" optional="true" value="200" label="The number of peaks to keep" help=""/> 46 <param name="n" argument="-algorithm:n" type="integer" optional="true" value="200" label="The number of peaks to keep" help=""/>
47 </section> 47 </section>
48 <expand macro="adv_opts_macro"> 48 <expand macro="adv_opts_macro">
49 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 49 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
50 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 50 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
51 <expand macro="list_string_san"/> 51 <expand macro="list_string_san"/>
52 </param> 52 </param>
53 </expand> 53 </expand>
54 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> 54 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
55 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 55 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
56 </param> 56 </param>
57 </inputs> 57 </inputs>
58 <outputs> 58 <outputs>
59 <data name="out" label="${tool.name} on ${on_string}: out" format="mzml"/> 59 <data name="out" label="${tool.name} on ${on_string}: out" format="mzml"/>
66 <expand macro="manutest_SpectraFilterNLargest"/> 66 <expand macro="manutest_SpectraFilterNLargest"/>
67 </tests> 67 </tests>
68 <help><![CDATA[Applies thresholdfilter to peak spectra. 68 <help><![CDATA[Applies thresholdfilter to peak spectra.
69 69
70 70
71 For more information, visit http://www.openms.de/documentation/TOPP_SpectraFilterNLargest.html]]></help> 71 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_SpectraFilterNLargest.html]]></help>
72 <expand macro="references"/> 72 <expand macro="references"/>
73 </tool> 73 </tool>