Mercurial > repos > galaxyp > openms_spectrafilterparentpeakmower

comparison SpectraFilterParentPeakMower.xml @ 11:75492ef0bff5 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author galaxyp
date Tue, 13 Oct 2020 19:44:27 +0000
parents e60558a87656
children 5694ec584f4c
comparison
equal deleted inserted replaced
10:a3404cddc8ee 11:75492ef0bff5
51 <param name="reduce_by_factor" argument="-algorithm:reduce_by_factor" type="integer" optional="true" value="0" label="Reduce the intensities of the precursor and related ions by a given factor (set 'set_to_zero' to 0)" help=""/> 51 <param name="reduce_by_factor" argument="-algorithm:reduce_by_factor" type="integer" optional="true" value="0" label="Reduce the intensities of the precursor and related ions by a given factor (set 'set_to_zero' to 0)" help=""/>
52 <param name="factor" argument="-algorithm:factor" type="float" optional="true" value="1000.0" label="Factor which is used to reduce the intensities if 'reduce_by_factor' is selected" help=""/> 52 <param name="factor" argument="-algorithm:factor" type="float" optional="true" value="1000.0" label="Factor which is used to reduce the intensities if 'reduce_by_factor' is selected" help=""/>
53 <param name="set_to_zero" argument="-algorithm:set_to_zero" type="integer" optional="true" value="1" label="Reduce the intensities of the precursor and related ions to zero" help=""/> 53 <param name="set_to_zero" argument="-algorithm:set_to_zero" type="integer" optional="true" value="1" label="Reduce the intensities of the precursor and related ions to zero" help=""/>
54 </section> 54 </section>
55 <expand macro="adv_opts_macro"> 55 <expand macro="adv_opts_macro">
56 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> 56 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/>
57 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> 57 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help="">
58 <expand macro="list_string_san"/> 58 <expand macro="list_string_san"/>
59 </param> 59 </param>
60 </expand> 60 </expand>
61 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> 61 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs">
62 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> 62 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option>
63 </param> 63 </param>
64 </inputs> 64 </inputs>
65 <outputs> 65 <outputs>
66 <data name="out" label="${tool.name} on ${on_string}: out" format="mzml"/> 66 <data name="out" label="${tool.name} on ${on_string}: out" format="mzml"/>
73 <expand macro="manutest_SpectraFilterParentPeakMower"/> 73 <expand macro="manutest_SpectraFilterParentPeakMower"/>
74 </tests> 74 </tests>
75 <help><![CDATA[Applies thresholdfilter to peak spectra. 75 <help><![CDATA[Applies thresholdfilter to peak spectra.
76 76
77 77
78 For more information, visit http://www.openms.de/documentation/TOPP_SpectraFilterParentPeakMower.html]]></help> 78 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/TOPP_SpectraFilterParentPeakMower.html]]></help>
79 <expand macro="references"/> 79 <expand macro="references"/>
80 </tool> 80 </tool>