Mercurial > repos > galaxyp > openms_spectrafilterthresholdmower
view SpectraFilterThresholdMower.xml @ 7:11697470e19a draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author | galaxyp |
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date | Fri, 17 May 2019 04:48:05 -0400 |
parents | aa0e988636bf |
children | e9ec21114394 |
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<?xml version='1.0' encoding='UTF-8'?> <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.--> <!--Proposed Tool Section: [Identification]--> <tool id="SpectraFilterThresholdMower" name="SpectraFilterThresholdMower" version="2.3.0"> <description>Applies thresholdfilter to peak spectra.</description> <macros> <token name="@EXECUTABLE@">SpectraFilterThresholdMower</token> <import>macros.xml</import> </macros> <expand macro="references"/> <expand macro="stdio"/> <expand macro="requirements"/> <command detect_errors="aggressive"><![CDATA[SpectraFilterThresholdMower #if $param_in: -in $param_in #end if #if $param_out: -out $param_out #end if #if $param_algorithm_threshold: -algorithm:threshold $param_algorithm_threshold #end if #if $adv_opts.adv_opts_selector=='advanced': #if $adv_opts.param_force: -force #end if #end if ]]></command> <inputs> <param name="param_in" type="data" format="mzml" optional="False" label="input file" help="(-in) "/> <param name="param_algorithm_threshold" type="float" value="0.05" label="Intensity threshold, peaks below this threshold are discarded" help="(-threshold) "/> <expand macro="advanced_options"> <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/> </expand> </inputs> <outputs> <data name="param_out" format="mzml"/> </outputs> <help>Applies thresholdfilter to peak spectra. For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_SpectraFilterThresholdMower.html</help> </tool>