Mercurial > repos > galaxyp > package_openms_1_11

diff tool_dependencies.xml @ 3:c2722f62c7ad draft

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Uploaded
author bgruening
date Tue, 19 Nov 2013 18:26:39 -0500
parents 22f618a19f69
children b4b3c6103f36
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Nov 15 06:48:39 2013 -0500
+++ b/tool_dependencies.xml	Tue Nov 19 18:26:39 2013 -0500
@@ -4,10 +4,13 @@
         <repository changeset_revision="7f67694b167c" name="package_libtool_2_4" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="Qt" version="4.8">
-        <repository changeset_revision="efd2620ae8bd" name="package_qt_4_8" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="07e57d7a3fe2" name="package_qt_4_8" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="zlib" version="1.2.8">
-        <repository changeset_revision="a7636aa0a747" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="31f1e69aae89" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="boost" version="1.53.0">
+        <repository changeset_revision="dbdde1a2d0c5" name="package_boost_1_53" owner="iuc" prior_installation_required="True" toolshed="http://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="openms" version="1.11.1">
         <install version="1.0">
@@ -19,16 +22,26 @@
                     <repository changeset_revision="7f67694b167c" name="package_libtool_2_4" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
                         <package name="libtool" version="2.4" />
                     </repository>
-                    <repository changeset_revision="efd2620ae8bd" name="package_qt_4_8" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="07e57d7a3fe2" name="package_qt_4_8" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
                         <package name="Qt" version="4.8 " />
                     </repository>
-                    <repository changeset_revision="a7636aa0a747" name="package_zlib_1_2_8" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="31f1e69aae89" name="package_zlib_1_2_8" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
                         <package name="zlib" version="1.2.8 " />
                     </repository>
+                    <repository changeset_revision="dbdde1a2d0c5" name="package_boost_1_53" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu">
+                        <package name="boost" version="1.53.0 " />
+                    </repository>
                 </action>
 
                 <action type="change_directory">contrib</action>
-                <action type="shell_command">cmake .</action>
+                <action type="shell_command">cmake . -DBUILD_TYPE=SEQAN</action>
+                <action type="shell_command">cmake . -DBUILD_TYPE=LIBSVM</action>
+                <action type="shell_command">cmake . -DBUILD_TYPE=XERCESC</action>
+                <action type="shell_command">cmake . -DBUILD_TYPE=GSL</action>
+                <action type="shell_command">cmake . -DBUILD_TYPE=COINOR</action>
+                <action type="shell_command">cmake . -DBUILD_TYPE=BZIP2</action>
+                <action type="shell_command">cmake . -DBUILD_TYPE=GLPK</action>
+
                 <action type="change_directory">..</action>
                 <action type="shell_command">cmake . -DINSTALL_PREFIX=$INSTALL_DIR</action>
                 <action type="shell_command">make doc_minimal</action>