Mercurial > repos > galaxyp > package_peptideshaker_1_10

annotate tool_dependencies.xml @ 0:63441af662c0 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
author galaxyp
date Tue, 10 May 2016 06:30:52 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
1 <?xml version="1.0"?>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
2 <tool_dependency>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
3 <package name="peptide_shaker" version="1.10">
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
4 <install version="1.0">
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
5 <actions>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
6 <action type="download_by_url">http://genesis.ugent.be/maven2/eu/isas/peptideshaker/PeptideShaker/1.10.2/PeptideShaker-1.10.2.zip</action>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
7 <action type="move_directory_files">
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
8 <source_directory>../PeptideShaker-1.10.2</source_directory>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
9 <destination_directory>$INSTALL_DIR/</destination_directory>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
10 </action>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
11 <action type="set_environment">
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
13 <environment_variable name="PEPTIDESHAKER_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
14 <environment_variable name="PEPTIDESHAKER_JAR_PATH" action="set_to">$INSTALL_DIR/PeptideShaker-1.10.2.jar</environment_variable>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
15 </action>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
16 </actions>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
17 </install>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
18 <readme>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
19 Install Galaxy package application for PeptideShaker 1.10
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
20 http://peptide-shaker.googlecode.com
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
21
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
22 NOTE: Installation from Galaxy requires release v15.10 or later
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
23 or requires commits :
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
24 - https://github.com/galaxyproject/galaxy/commit/197c7b21b209a7b6fbdb9a8a11c232a2b88523fc#diff-f304e7b7451d47608f7ded8f2b9c16d2
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
25 </readme>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
26 </package>
63441af662c0 planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
galaxyp
parents:
diff changeset
27 </tool_dependency>