Mercurial > repos > galaxyp > package_peptideshaker_1_11

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planemo upload commit 5d078ec2d5823becc65a3bad14da6db9e0d90fdd-dirty
author galaxyp
date Fri, 10 Jun 2016 09:45:13 -0400
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1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="peptide_shaker" version="1.11">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">http://genesis.ugent.be/maven2/eu/isas/peptideshaker/PeptideShaker/1.11.0/PeptideShaker-1.11.0.zip</action>
7 <action type="move_directory_files">
8 <source_directory>../PeptideShaker-1.11.0</source_directory>
9 <destination_directory>$INSTALL_DIR/</destination_directory>
10 </action>
11 <action type="set_environment">
12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
13 <environment_variable name="PEPTIDESHAKER_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
14 <environment_variable name="PEPTIDESHAKER_JAR_PATH" action="set_to">$INSTALL_DIR/PeptideShaker-1.11.0.jar</environment_variable>
15 </action>
16 </actions>
17 </install>
18 <readme>
19 Install Galaxy package application for PeptideShaker 1.11
20 http://peptide-shaker.googlecode.com
21
22 NOTE: Installation from Galaxy requires release v15.10 or later
23 or requires commits :
24 - https://github.com/galaxyproject/galaxy/commit/197c7b21b209a7b6fbdb9a8a11c232a2b88523fc#diff-f304e7b7451d47608f7ded8f2b9c16d2
25 </readme>
26 </package>
27 </tool_dependency>