# HG changeset patch # User galaxyp # Date 1697611240 0 # Node ID b5489f81c2fa33949328104aed7b51d8643c027a # Parent a07976bbc4d90321813965479b9804f91135253c planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/pepquery2 commit fb66172091bb840e4cb673975fd1ebbfd8dcf3f7 diff -r a07976bbc4d9 -r b5489f81c2fa macros.xml --- a/macros.xml Sun Nov 06 16:25:25 2022 +0000 +++ b/macros.xml Wed Oct 18 06:40:40 2023 +0000 @@ -1,6 +1,6 @@ 2.0.2 - 0 + 1 10.1101/gr.235028.118 diff -r a07976bbc4d9 -r b5489f81c2fa pepquery2.xml --- a/pepquery2.xml Sun Nov 06 16:25:25 2022 +0000 +++ b/pepquery2.xml Wed Oct 18 06:40:40 2023 +0000 @@ -33,6 +33,9 @@ ## PepQuery command pepquery -Xmx\$[ \${GALAXY_MEMORY_MB:-8192} / 1024 ]g +#if $digestion.enzyme == '0' + -XX:ThreadStackSize=2048 +#end if #if $validation.task_type == "known" -s 2 $validation.decoy #else @@ -677,6 +680,72 @@ + + + + + +
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