Mercurial > repos > galaxyp > peptide_to_gff

annotate test-data/ProtData.tsv @ 3:42c89c1bbda9 default tip

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author Jim Johnson <jj@umn.edu>
date Mon, 15 Jun 2015 15:44:54 -0500
parents cec60c540546
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1 N Unused Total %Cov %Cov(50) %Cov(95) Accessions Names Used Annotation Contrib Conf Sequence Modifications Cleavages dMass Prec MW Prec m/z Theor MW Theor m/z Theor z Sc Spectrum Specific Time PrecursorSignal PrecursorElution 114:115 %Err 114:115 116:115 %Err 116:115 117:115 %Err 117:115 Area 114 Err 114 Area 115 Err 115 Area 116 Err 116 Area 117 Err 117 Background
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2 997 0.74 0.74 29.03000116 29.03000116 29.03000116 ENST00000215637_5 [127 - 181] cdna:known chromosome:GRCh37:19:496454:505347:1 gene:ENSG00000099866 gene_biotype:protein_coding transcript_biotype:protein_coding 0.742321432 96.49000168 VEPPEPVVAVALGASRQL missed R-K@8 0.00243925 1003.525696 502.7701 1003.523315 502.7689209 2 8 24.1.1.4288.1 1 0 -1 -1
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3 997 0.74 0.74 29.03000116 29.03000116 29.03000116 ENST00000215637_5 [358 - 418] cdna:known chromosome:GRCh37:19:496454:505347:1 gene:ENSG00000099866 gene_biotype:protein_coding transcript_biotype:protein_coding 0.742321432 96.49000168 HTVQLLVYAFPDQLTVSPAA missed R-K@8 0.00243925 1003.525696 502.7701 1003.523315 502.7689209 2 8 24.1.1.4288.1 1 0 -1 -1
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4 997 0.74 0.74 29.03000116 29.03000116 29.03000116 ENST00000215637_5 [700 - 988] cdna:known chromosome:GRCh37:19:496454:505347:1 gene:ENSG00000099866 gene_biotype:protein_coding transcript_biotype:protein_coding 0.742321432 96.49000168 QAIPVLHSPTSPEPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPDKTSPEPAPQQGSTHTPRSPGSTRTRRPEISQAGPTQGEVIPTGSSKPA missed R-K@8 0.00243925 1003.525696 502.7701 1003.523315 502.7689209 2 8 24.1.1.4288.1 1 0 -1 -1
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5 694 2 2 43.4799999 43.4799999 43.4799999 ENST00000269812_35 [113 - 161]cdna:known chromosome:GRCh37:19:281043:291386:-1 gene:ENSG00000141934 gene_biotype:protein_coding transcript_biotype:protein_coding 2 99.00000095 FAILTLVNAPYKRGFY 0.032429099 1100.622437 551.3185 1100.589966 551.3022461 2 11 35.1.1.5723.1 1 0 -1 -1
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6 694 2 2 43.4799999 43.4799999 43.4799999 ENST00000269812_36 [218 - 299]cdna:known chromosome:GRCh37:19:281043:291386:-1 gene:ENSG00000141934 gene_biotype:protein_coding transcript_biotype:protein_coding 2 99.00000095 MAGVTITATVILVSAGEAYLVYTDRLY 0.032429099 1100.622437 551.3185 1100.589966 551.3022461 2 11 35.1.1.5723.1 1 0 -1 -1
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galaxyp
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7 694 2 2 43.4799999 43.4799999 43.4799999 ENST00000269812_37 [521 - 602]cdna:known chromosome:GRCh37:19:281043:291386:-1 gene:ENSG00000141934 gene_biotype:protein_coding transcript_biotype:protein_coding 2 99.00000095 TEARLSFYSGHSSFGMYCMVFLALYVQ 0.032429099 1100.622437 551.3185 1100.589966 551.3022461 2 11 35.1.1.5723.1 1 0 -1 -1