Mercurial > repos > galaxyp > peptide_to_gff

comparison peptide_to_gff.xml @ 2:4c87b4cc1176

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Add simple label to output files for IGV display application (it does not handle punctuation in URLs)
author Jim Johnson <jj@umn.edu>
date Mon, 15 Jun 2015 15:22:59 -0500
parents 0cd177bc347d
children 42c89c1bbda9
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1:0cd177bc347d 2:4c87b4cc1176
112 </conditional> 112 </conditional>
113 </repeat> 113 </repeat>
114 <param name="show_unmapped" type="boolean" truevalue="yes" falsevalue="no" checked="False" label="Show unmapped lines"/> 114 <param name="show_unmapped" type="boolean" truevalue="yes" falsevalue="no" checked="False" label="Show unmapped lines"/>
115 </inputs> 115 </inputs>
116 <outputs> 116 <outputs>
117 <data format="gff3" metadata_source="input_file" name="output_gff" /> 117 <data format="gff3" metadata_source="input_file" name="output_gff" label="peptides.gff3"/>
118 <data format_source="input_file" metadata_source="input_file" name="unmapped"> 118 <data format_source="input_file" metadata_source="input_file" name="unmapped" label="peptides.unmapped">
119 <filter>show_unmapped == True</filter> 119 <filter>show_unmapped == True</filter>
120 </data> 120 </data>
121 </outputs> 121 </outputs>
122 <stdio> 122 <stdio>
123 <exit_code range="1:" level="fatal" description="Bad input dataset" /> 123 <exit_code range="1:" level="fatal" description="Bad input dataset" />