Mercurial > repos > galaxyp > peptide_to_gff

comparison test-data/ProtDataBlat.gff3 @ 0:cec60c540546

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author galaxyp
date Wed, 26 Jun 2013 15:56:16 -0400
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-1:000000000000 0:cec60c540546
1 ##gff-version 3
2 ##sequence-region 19 1 287484
3 19 MassSpec peptide 282299 287484 10.0 - 0 ID=TEARLSFYSGHSSFGMYCMVFLALYVQ
4 19 MassSpec CDS 287474 287484 . - 0 Parent=TEARLSFYSGHSSFGMYCMVFLALYVQ;transcript_id=ENST00000269812
5 19 MassSpec CDS 282752 282809 . - 1 Parent=TEARLSFYSGHSSFGMYCMVFLALYVQ;transcript_id=ENST00000269812
6 19 MassSpec CDS 282299 282310 . - 0 Parent=TEARLSFYSGHSSFGMYCMVFLALYVQ;transcript_id=ENST00000269812
7 ##sequence-region 19 1 288055
8 19 MassSpec peptide 287707 288055 10.0 - 0 ID=MAGVTITATVILVSAGEAYLVYTDRLY
9 19 MassSpec CDS 288020 288055 . - 0 Parent=MAGVTITATVILVSAGEAYLVYTDRLY;transcript_id=ENST00000269812
10 19 MassSpec CDS 287707 287751 . - 0 Parent=MAGVTITATVILVSAGEAYLVYTDRLY;transcript_id=ENST00000269812
11 ##sequence-region 19 1 288160
12 19 MassSpec peptide 288113 288160 10.0 - 0 ID=FAILTLVNAPYKRGFY
13 19 MassSpec CDS 288113 288160 . - 0 Parent=FAILTLVNAPYKRGFY;transcript_id=ENST00000269812
14 ##sequence-region 19 1 497915
15 19 MassSpec peptide 497862 497915 10.0 + 0 ID=VEPPEPVVAVALGASRQL
16 19 MassSpec CDS 497862 497915 . + 0 Parent=VEPPEPVVAVALGASRQL;transcript_id=ENST00000215637
17 ##sequence-region 19 1 498530
18 19 MassSpec peptide 498093 498530 10.0 + 0 ID=HTVQLLVYAFPDQLTVSPAA
19 19 MassSpec CDS 498093 498117 . + 0 Parent=HTVQLLVYAFPDQLTVSPAA;transcript_id=ENST00000215637
20 19 MassSpec CDS 498496 498530 . + 2 Parent=HTVQLLVYAFPDQLTVSPAA;transcript_id=ENST00000215637
21 ##sequence-region 19 1 504758
22 19 MassSpec peptide 498813 504758 10.0 + 0 ID=QAIPVLHSPTSPEPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPDKTSPEPAPQQGSTHTPRSPGSTRTRRPEISQAGPTQGEVIPTGSSKPA
23 19 MassSpec CDS 498813 498825 . + 0 Parent=QAIPVLHSPTSPEPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPDKTSPEPAPQQGSTHTPRSPGSTRTRRPEISQAGPTQGEVIPTGSSKPA;transcript_id=ENST00000215637
24 19 MassSpec CDS 501669 501929 . + 2 Parent=QAIPVLHSPTSPEPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPDKTSPEPAPQQGSTHTPRSPGSTRTRRPEISQAGPTQGEVIPTGSSKPA;transcript_id=ENST00000215637
25 19 MassSpec CDS 504745 504758 . + 2 Parent=QAIPVLHSPTSPEPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPDKTSPEPAPQQGSTHTPRSPGSTRTRRPEISQAGPTQGEVIPTGSSKPA;transcript_id=ENST00000215637