Mercurial > repos > galaxyp > peptideshaker
annotate test-data/peptide_shaker_hierarchical_result2.tabular @ 31:f3f67aa3123b draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 9434ce2f6323d91e6b10eeabab531d5e13ef4a6f
| author | galaxyp |
|---|---|
| date | Wed, 18 Jan 2017 16:43:44 -0500 |
| parents | ad60446b1e93 |
| children |
| rev | line source |
|---|---|
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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1 Main Accession Description MW [kDa] Possible Coverage [%] Coverage [%] Spectrum Counting NSAF Confidently Localized Modification Sites # Confidently Localized Modification Sites Ambiguously Localized Modification Sites #Ambiguously Localized Modification Sites Protein Inference Secondary Accessions Protein Group #Validated Peptides #Peptides #Unique #Validated PSMs #PSMs Confidence [%] Decoy Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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2 1 cds.comp41779_c0_seq1 m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67 69.88215380565927 92.52 37.58 0.017651472642866785 Related Proteins cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 15 15 15 40 40 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
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changeset
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3 Protein(s) Sequence AAs Before AAs After Variable Modifications Fixed Modifications Localization Confidence #Validated PSMs #PSMs Confidence [%] Decoy Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
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changeset
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4 1.1 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 LHVEMESMIEELQMLMDAK NK; NK LS; LS 4 4 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
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5 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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21
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changeset
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6 1.1.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 LHVEMESMIEELQMLMDAK NH2-LHVEMESMIEELQMLMDAK-COOH searchgui_tinyspectra1.mgf Cmpd 1198, +MSn(1139.0413), 115.6 min -1.0 1139.04127 2+ 2+ 2276.05608409959 0 5.225020941968939 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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21
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changeset
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7 1.1.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 LHVEMESMIEELQMLMDAK NH2-LHVEMESMIEELQMLMDAK-COOH searchgui_tinyspectra1.mgf Cmpd 1198, MSn(1139.0413), 115.6 min -1.0 1139.04127 2+ 2+ 2276.05608409959 0 5.225020941968939 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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8 1.1.3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 LHVEMESMIEELQMLMDAK NH2-LHVEMESMIEELQMLMDAK-COOH searchgui_tinyspectra1.mgf Cmpd 1197, +MSn(759.6966), 115.6 min -1.0 759.69661 3+ 3+ 2276.05608409959 0 5.2286496671522364 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
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changeset
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9 1.1.4 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 LHVEMESMIEELQMLMDAK NH2-LHVEMESMIEELQMLMDAK-COOH searchgui_tinyspectra1.mgf Cmpd 1197, MSn(759.6966), 115.6 min -1.0 759.69661 3+ 3+ 2276.05608409959 0 5.2286496671522364 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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changeset
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10 1.2 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 NLLLDANKENGELK AK; AK IS; IS 4 4 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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11 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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21
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changeset
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12 1.2.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 NLLLDANKENGELK NH2-NLLLDANKENGELK-COOH searchgui_tinyspectra1.mgf Cmpd 207, MSn(785.9179), 35.7 min -1.0 785.91791 2+ 2+ 1569.8362356486905 0 -9.522902824571501 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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changeset
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13 1.2.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 NLLLDANKENGELK NH2-NLLLDANKENGELK-COOH searchgui_tinyspectra1.mgf Cmpd 204, +MSn(524.2825), 35.5 min -1.0 524.28252 3+ 3+ 1569.8362356486905 0 -6.678955564950069 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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21
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changeset
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14 1.2.3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 NLLLDANKENGELK NH2-NLLLDANKENGELK-COOH searchgui_tinyspectra1.mgf Cmpd 207, +MSn(785.9179), 35.7 min -1.0 785.91791 2+ 2+ 1569.8362356486905 0 -9.522902824571501 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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15 1.2.4 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 NLLLDANKENGELK NH2-NLLLDANKENGELK-COOH searchgui_tinyspectra1.mgf Cmpd 204, MSn(524.2825), 35.5 min -1.0 524.28252 3+ 3+ 1569.8362356486905 0 -6.678955564950069 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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16 1.3 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 SLQAENEQLR VR; VR LK; LK 2 2 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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17 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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18 1.3.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 SLQAENEQLR NH2-SLQAENEQLR-COOH searchgui_tinyspectra1.mgf Cmpd 39, MSn(594.3056), 25.0 min -1.0 594.30561 2+ 2+ 1186.5942144781802 0 2.0634108237361883 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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19 1.3.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 SLQAENEQLR NH2-SLQAENEQLR-COOH searchgui_tinyspectra1.mgf Cmpd 39, +MSn(594.3056), 25.0 min -1.0 594.30561 2+ 2+ 1186.5942144781802 0 2.0634108237361883 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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changeset
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20 1.4 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 EFDVEPLKEAYQAEIDEAK RR; RR NL; NL 2 2 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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21 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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21
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changeset
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22 1.4.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 EFDVEPLKEAYQAEIDEAK NH2-EFDVEPLKEAYQAEIDEAK-COOH searchgui_tinyspectra1.mgf Cmpd 736, MSn(742.0258), 75.1 min -1.0 742.02585 3+ 3+ 2223.05830922026 0 -1.1628605149493787 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
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changeset
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23 1.4.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 EFDVEPLKEAYQAEIDEAK NH2-EFDVEPLKEAYQAEIDEAK-COOH searchgui_tinyspectra1.mgf Cmpd 736, +MSn(742.0258), 75.1 min -1.0 742.02585 3+ 3+ 2223.05830922026 0 -1.1628605149493787 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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24 1.5 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 MEIITITNQLQR MK; MK SN; SN 2 2 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
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changeset
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25 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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changeset
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26 1.5.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 MEIITITNQLQR NH2-MEIITITNQLQR-COOH searchgui_tinyspectra1.mgf Cmpd 636, MSn(730.3981), 66.9 min -1.0 730.39814 2+ 2+ 1458.7864490053003 0 -3.232431329032245 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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27 1.5.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 MEIITITNQLQR NH2-MEIITITNQLQR-COOH searchgui_tinyspectra1.mgf Cmpd 636, +MSn(730.3981), 66.9 min -1.0 730.39814 2+ 2+ 1458.7864490053003 0 -3.232431329032245 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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28 1.6 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 YESQLSQIR AR; AR QS; QS 2 2 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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21
diff
changeset
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29 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
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changeset
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30 1.6.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 YESQLSQIR NH2-YESQLSQIR-COOH searchgui_tinyspectra1.mgf Cmpd 67, MSn(562.2947), 26.3 min -1.0 562.29468 2+ 2+ 1122.5669371011802 0 6.998127984108653 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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31 1.6.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 YESQLSQIR NH2-YESQLSQIR-COOH searchgui_tinyspectra1.mgf Cmpd 67, +MSn(562.2947), 26.3 min -1.0 562.29468 2+ 2+ 1122.5669371011802 0 6.998127984108653 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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32 1.7 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 VGNLEEELEFLR QK; QK SV; SV 4 4 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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21
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33 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
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changeset
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34 1.7.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 VGNLEEELEFLR NH2-VGNLEEELEFLR-COOH searchgui_tinyspectra1.mgf Cmpd 875, MSn(483.2538), 89.2 min -1.0 483.25374 3+ 3+ 1446.7354589782603 0 2.711916908512312 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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35 1.7.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 VGNLEEELEFLR NH2-VGNLEEELEFLR-COOH searchgui_tinyspectra1.mgf Cmpd 871, +MSn(724.3762), 88.9 min -1.0 724.37624 2+ 2+ 1446.7354589782603 0 1.7035983403308754 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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36 1.7.3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 VGNLEEELEFLR NH2-VGNLEEELEFLR-COOH searchgui_tinyspectra1.mgf Cmpd 871, MSn(724.3762), 88.9 min -1.0 724.37624 2+ 2+ 1446.7354589782603 0 1.7035983403308754 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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21
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37 1.7.4 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 VGNLEEELEFLR NH2-VGNLEEELEFLR-COOH searchgui_tinyspectra1.mgf Cmpd 875, +MSn(483.2538), 89.2 min -1.0 483.25374 3+ 3+ 1446.7354589782603 0 2.711916908512312 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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38 1.8 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 ISITTYEEEIEDLHATAR LK; LK IN; IN 2 2 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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39 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
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40 1.8.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 ISITTYEEEIEDLHATAR NH2-ISITTYEEEIEDLHATAR-COOH searchgui_tinyspectra1.mgf Cmpd 752, +MSn(697.6842), 76.3 min -1.0 697.68418 3+ 3+ 2090.0167787614505 0 6.6562738302421005 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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41 1.8.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 ISITTYEEEIEDLHATAR NH2-ISITTYEEEIEDLHATAR-COOH searchgui_tinyspectra1.mgf Cmpd 752, MSn(697.6842), 76.3 min -1.0 697.68418 3+ 3+ 2090.0167787614505 0 6.6562738302421005 0 100.0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
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42 1.9 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 SHVVGAGLGGGSMGSMNQSMSLHGGR RR; RR AS; AS 2 2 100.0 0 Doubtful |
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ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
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43 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
44 1.9.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 SHVVGAGLGGGSMGSMNQSMSLHGGR NH2-SHVVGAGLGGGSMGSMNQSMSLHGGR-COOH searchgui_tinyspectra1.mgf Cmpd 220, MSn(824.3852), 36.3 min -1.0 824.38516 3+ 3+ 2470.1263804604496 0 2.939629370057349 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
45 1.9.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 SHVVGAGLGGGSMGSMNQSMSLHGGR NH2-SHVVGAGLGGGSMGSMNQSMSLHGGR-COOH searchgui_tinyspectra1.mgf Cmpd 220, +MSn(824.3852), 36.3 min -1.0 824.38516 3+ 3+ 2470.1263804604496 0 2.939629370057349 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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46 1.10 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 ISTGYITENIGGFR NR; NR SE; SE 4 4 100.0 0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
47 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
48 1.10.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 ISTGYITENIGGFR NH2-ISTGYITENIGGFR-COOH searchgui_tinyspectra1.mgf Cmpd 588, MSn(764.3961), 63.5 min -1.0 764.39611 2+ 2+ 1526.7729071161402 0 3.1135461012602375 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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49 1.10.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 ISTGYITENIGGFR NH2-ISTGYITENIGGFR-COOH searchgui_tinyspectra1.mgf Cmpd 588, +MSn(764.3961), 63.5 min -1.0 764.39611 2+ 2+ 1526.7729071161402 0 3.1135461012602375 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
50 1.10.3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 ISTGYITENIGGFR NH2-ISTGYITENIGGFR-COOH searchgui_tinyspectra1.mgf Cmpd 591, MSn(509.9328), 63.7 min -1.0 509.93283 3+ 3+ 1526.7729071161402 0 2.4535863107993414 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
51 1.10.4 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 ISTGYITENIGGFR NH2-ISTGYITENIGGFR-COOH searchgui_tinyspectra1.mgf Cmpd 591, +MSn(509.9328), 63.7 min -1.0 509.93283 3+ 3+ 1526.7729071161402 0 2.4535863107993414 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
52 1.11 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 ASLGMAAGVAGGIATK GR; GR DM; DM 2 2 100.0 0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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53 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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54 1.11.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 ASLGMAAGVAGGIATK NH2-ASLGMAAGVAGGIATK-COOH searchgui_tinyspectra1.mgf Cmpd 357, MSn(687.8723), 46.6 min -1.0 687.87224 2+ 2+ 1373.7336851564505 0 -2.731669916283406 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
55 1.11.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 ASLGMAAGVAGGIATK NH2-ASLGMAAGVAGGIATK-COOH searchgui_tinyspectra1.mgf Cmpd 357, +MSn(687.8723), 46.6 min -1.0 687.87224 2+ 2+ 1373.7336851564505 0 -2.731669916283406 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
56 1.12 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 INEDRIDELQDKVNK AR; AR LI; LI 2 2 100.0 0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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57 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
58 1.12.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 INEDRIDELQDKVNK NH2-INEDRIDELQDKVNK-COOH searchgui_tinyspectra1.mgf Cmpd 81, +MSn(610.3171), 27.0 min -1.0 610.31708 3+ 3+ 1827.9326552146704 0 -1.7720894394949223 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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59 1.12.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 INEDRIDELQDKVNK NH2-INEDRIDELQDKVNK-COOH searchgui_tinyspectra1.mgf Cmpd 81, MSn(610.3171), 27.0 min -1.0 610.31708 3+ 3+ 1827.9326552146704 0 -1.7720894394949223 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
60 1.13 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 KGDIIATVDEWGPVNR AK; AK; AK NS; NS; NS 2 2 100.0 0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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61 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
62 1.13.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2, cds.comp41779_c0_seq3 KGDIIATVDEWGPVNR NH2-KGDIIATVDEWGPVNR-COOH searchgui_tinyspectra1.mgf Cmpd 582, MSn(590.6452), 63.2 min -1.0 590.64518 3+ 3+ 1768.9107975712802 0 1.6439836590138295 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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63 1.13.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2, cds.comp41779_c0_seq3 KGDIIATVDEWGPVNR NH2-KGDIIATVDEWGPVNR-COOH searchgui_tinyspectra1.mgf Cmpd 582, +MSn(590.6452), 63.2 min -1.0 590.64518 3+ 3+ 1768.9107975712802 0 1.6439836590138295 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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64 1.14 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 SVISIGEVESEGQYVTLENTSSGR SK; SK; SK SK; SK; SK 2 2 100.0 0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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65 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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66 1.14.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2, cds.comp41779_c0_seq3 SVISIGEVESEGQYVTLENTSSGR NH2-SVISIGEVESEGQYVTLENTSSGR-COOH searchgui_tinyspectra1.mgf Cmpd 758, +MSn(847.7508), 76.8 min -1.0 847.75082 3+ 3+ 2540.2242053283903 0 2.5264056585684305 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
67 1.14.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2, cds.comp41779_c0_seq3 SVISIGEVESEGQYVTLENTSSGR NH2-SVISIGEVESEGQYVTLENTSSGR-COOH searchgui_tinyspectra1.mgf Cmpd 758, MSn(847.7508), 76.8 min -1.0 847.75082 3+ 3+ 2540.2242053283903 0 2.5264056585684305 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
68 1.15 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 LISATSISPEHK DR; DR; DR ID; ID; ID 4 4 100.0 0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
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69 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
70 1.15.1 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2, cds.comp41779_c0_seq3 LISATSISPEHK NH2-LISATSISPEHK-COOH searchgui_tinyspectra1.mgf Cmpd 75, +MSn(641.8547), 26.7 min -1.0 641.85466 2+ 2+ 1281.6928658902905 0 1.4810042052113237 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
71 1.15.2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2, cds.comp41779_c0_seq3 LISATSISPEHK NH2-LISATSISPEHK-COOH searchgui_tinyspectra1.mgf Cmpd 72, +MSn(428.2391), 26.6 min -1.0 428.23909 3+ 3+ 1281.6928658902905 0 2.0041097707959827 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
72 1.15.3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2, cds.comp41779_c0_seq3 LISATSISPEHK NH2-LISATSISPEHK-COOH searchgui_tinyspectra1.mgf Cmpd 75, MSn(641.8547), 26.7 min -1.0 641.85466 2+ 2+ 1281.6928658902905 0 1.4810042052113237 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
73 1.15.4 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2, cds.comp41779_c0_seq3 LISATSISPEHK NH2-LISATSISPEHK-COOH searchgui_tinyspectra1.mgf Cmpd 72, MSn(428.2391), 26.6 min -1.0 428.23909 3+ 3+ 1281.6928658902905 0 2.0041097707959827 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
74 2 cds.comp52727_c0_seq1 m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91 69.96963713242043 100.0 3.25 0.0032520325203252032 Related Proteins cds.comp52727_c0_seq2 cds.comp52727_c0_seq1, cds.comp52727_c0_seq2 1 1 1 2 2 100.0 0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
75 Protein(s) Sequence AAs Before AAs After Variable Modifications Fixed Modifications Localization Confidence #Validated PSMs #PSMs Confidence [%] Decoy Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
76 2.1 cds.comp52727_c0_seq1; cds.comp52727_c0_seq2 EIRDEYDNQLNLLSADLESK MR; MR YQ; YQ 2 2 100.0 0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
77 Protein(s) Sequence Modified Sequence Variable Modifications Fixed Modifications Spectrum File Spectrum Title Spectrum Scan Number RT m/z Measured Charge Identification Charge Theoretical Mass Isotope Number Precursor m/z Error [ppm] Decoy Localization Confidence Probabilistic PTM score D-score Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
78 2.1.1 cds.comp52727_c0_seq1, cds.comp52727_c0_seq2 EIRDEYDNQLNLLSADLESK NH2-EIRDEYDNQLNLLSADLESK-COOH searchgui_tinyspectra1.mgf Cmpd 748, +MSn(789.0604), 76.1 min -1.0 789.06034 3+ 3+ 2364.1444984557097 0 6.206637734347747 0 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
79 2.1.2 cds.comp52727_c0_seq1, cds.comp52727_c0_seq2 EIRDEYDNQLNLLSADLESK NH2-EIRDEYDNQLNLLSADLESK-COOH searchgui_tinyspectra1.mgf Cmpd 748, MSn(789.0604), 76.1 min -1.0 789.06034 3+ 3+ 2364.1444984557097 0 6.206637734347747 0 100.0 Doubtful |