Mercurial > repos > galaxyp > peptideshaker

annotate test-data/peptide_shaker_peptides_result2.tabular @ 32:ff592231f118 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 047efcfa1e9f45648e6e81d3776a1a93e2cfe46d
author galaxyp
date Wed, 25 Jan 2017 15:37:43 -0500
parents ad60446b1e93
children
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30
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
1 Protein(s) Protein Group(s) #Validated Protein Group(s) Unique Database Sequence Modified Sequence Position AAs Before AAs After Variable Modifications Fixed Modifications Localization Confidence #Validated PSMs #PSMs Confidence [%] Validation
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
2 1 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 SVISIGEVESEGQYVTLENTSSGR NH2-SVISIGEVESEGQYVTLENTSSGR-COOH 511; 504; 29 SK; SK; SK SK; SK; SK 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
3 2 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 YESQLSQIR NH2-YESQLSQIR-COOH 323; 323 AR; AR QS; QS 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
4 3 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 SHVVGAGLGGGSMGSMNQSMSLHGGR NH2-SHVVGAGLGGGSMGSMNQSMSLHGGR-COOH 37; 37 RR; RR AS; AS 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
5 4 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 EFDVEPLKEAYQAEIDEAK NH2-EFDVEPLKEAYQAEIDEAK-COOH 128; 128 RR; RR NL; NL 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
6 5 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 ISITTYEEEIEDLHATAR NH2-ISITTYEEEIEDLHATAR-COOH 161; 161 LK; LK IN; IN 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
7 6 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 ISTGYITENIGGFR NH2-ISTGYITENIGGFR-COOH 442; 442 NR; NR SE; SE 4 4 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
8 7 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 ASLGMAAGVAGGIATK NH2-ASLGMAAGVAGGIATK-COOH 63; 63 GR; GR DM; DM 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
9 8 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 LISATSISPEHK NH2-LISATSISPEHK-COOH 549; 542; 67 DR; DR; DR ID; ID; ID 4 4 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
10 9 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 LHVEMESMIEELQMLMDAK NH2-LHVEMESMIEELQMLMDAK-COOH 403; 403 NK; NK LS; LS 4 4 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
11 10 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 NLLLDANKENGELK NH2-NLLLDANKENGELK-COOH 147; 147 AK; AK IS; IS 4 4 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
12 11 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 SLQAENEQLR NH2-SLQAENEQLR-COOH 110; 110 VR; VR LK; LK 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
13 12 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 KGDIIATVDEWGPVNR NH2-KGDIIATVDEWGPVNR-COOH 590; 583; 108 AK; AK; AK NS; NS; NS 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
14 13 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 MEIITITNQLQR NH2-MEIITITNQLQR-COOH 373; 373 MK; MK SN; SN 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
15 14 cds.comp52727_c0_seq1; cds.comp52727_c0_seq2 cds.comp52727_c0_seq1, cds.comp52727_c0_seq2 (Doubtful) 1 1 EIRDEYDNQLNLLSADLESK NH2-EIRDEYDNQLNLLSADLESK-COOH 298; 298 MR; MR YQ; YQ 2 2 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
16 15 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 VGNLEEELEFLR NH2-VGNLEEELEFLR-COOH 254; 254 QK; QK SV; SV 4 4 100.0 Doubtful
ad60446b1e93 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents: 21
diff changeset
17 16 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 INEDRIDELQDKVNK NH2-INEDRIDELQDKVNK-COOH 179; 179 AR; AR LI; LI 2 2 100.0 Doubtful