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comparison test-data/peptideshaker_reports_output_proteinsnonvalidated.tabular @ 58:07ff622ec007 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
author galaxyp
date Sat, 10 Apr 2021 15:57:17 +0000
parents bb0130ff73ce
children
comparison
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57:da885ca16cb2 58:07ff622ec007
1 Protein Inference Main Accession Description Protein Group Secondary Accessions Chromosome Gene Name Taxonomy Validated Coverage [%] All Coverage [%] Possible Coverage [%] #Peptides #Validated Peptides #Unique Peptides #Validated Unique Peptides #PSMs #Validated PSMs Confidently Localized Modification Sites #Confidently Localized Modification Sites Ambiguously Localized Modification Sites #Ambiguously Localized Modification Sites Spectrum Counting MW [kDa] Confidence [%] Validation 1 Protein Inference Main Accession Description Protein Group Secondary Accessions Chromosome Gene Name Taxonomy Organism Identifier Validated Coverage [%] All Coverage [%] Possible Coverage [%] #Peptides #Validated Peptides #Unique Peptides #Validated Unique Peptides #PSMs #Validated PSMs Confidently Localized Modification Sites #Confidently Localized Modification Sites Ambiguously Localized Modification Sites #Ambiguously Localized Modification Sites Spectrum Counting MW [kDa] Confidence [%] Validation
2 1 Single Protein cds.comp8310_c0_seq2 m.1138 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 22.01 EValue:2.0e-16 cds.comp8310_c0_seq2 3.69 3.69 81.0 1 1 1 1 1 1 12239.035185720222 45.26545451338222 100.0 Doubtful 2 1 Single Protein cds.comp8310_c0_seq2 m.1138 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 22.01 EValue:2.0e-16 cds.comp8310_c0_seq2 3.69 3.69 81.0 1 1 1 1 1 1 12239.035185720222 45.26545451338222 100.0 Doubtful
3 2 Single Protein cds.comp41890_c0_seq1 m.9546 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 38.58 EValue:4.0e-20 cds.comp41890_c0_seq1 20.15 20.15 91.04 1 1 1 1 1 1 30798.227885377935 14.802380493830709 100.0 Doubtful 3 2 Single Protein cds.comp41890_c0_seq1 m.9546 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 38.58 EValue:4.0e-20 cds.comp41890_c0_seq1 20.15 20.15 91.04 1 1 1 1 1 1 30798.227885377935 14.802380493830709 100.0 Doubtful
4 3 Related Proteins cds.comp41779_c0_seq1 m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67 cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3 cds.comp41779_c0_seq2,cds.comp41779_c0_seq3 3.34 3.34 78.82 1 1 1 1 1 1 7590.674347507289 69.88215380565931 100.0 Doubtful 4 3 Related Proteins cds.comp41779_c0_seq1 m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67 cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3 cds.comp41779_c0_seq2,cds.comp41779_c0_seq3 3.34 3.34 78.82 1 1 1 1 1 1 7590.674347507289 69.88215380565931 100.0 Doubtful
5 4 Single Protein cds.comp41890_c0_seq1_REVERSED m.9546 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 38.58 EValue:4.0e-20-REVERSED cds.comp41890_c0_seq1_REVERSED 8.21 8.21 90.3 1 1 1 1 1 1 31052.758694348 14.802380493830709 100.0 Doubtful 5 4 Single Protein cds.comp41890_c0_seq1_REVERSED m.9546 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 38.58 EValue:4.0e-20-REVERSED cds.comp41890_c0_seq1_REVERSED 8.21 8.21 90.3 1 1 1 1 1 1 31052.758694348 14.802380493830709 100.0 Doubtful