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comparison peptide_shaker.xml @ 25:0986f68fb410 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb474693831a3375db79755e88641ad32b3b4e6-dirty
author galaxyp
date Sun, 21 Feb 2016 11:13:24 -0500
parents 815f93bb3e1b
children 3ef5a7dd1a36
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24:815f93bb3e1b 25:0986f68fb410
471 <option value="1">PhosphoRS</option> 471 <option value="1">PhosphoRS</option>
472 </param> 472 </param>
473 <when value="0" /> 473 <when value="0" />
474 <when value="1"> 474 <when value="1">
475 <param name="score_neutral_losses" label="Include Neutral Losses in A Score" type="boolean" truevalue="1" falsevalue="0" /> 475 <param name="score_neutral_losses" label="Include Neutral Losses in A Score" type="boolean" truevalue="1" falsevalue="0" />
476 <param name="ptm_threshold" label="The threshold to use for the PTM scores" value="" type="float" 476 <param name="ptm_threshold" label="The threshold to use for the PTM scores" optional="true" value="" type="float"
477 help="Automatic mode will be used if not set" /> 477 help="Automatic mode will be used if not set" />
478 </when> 478 </when>
479 </conditional> 479 </conditional>
480 <!-- SKIPPING -protein_fraction_mw_confidence ${processing_options.protein_fraction_mw_confidence} --> 480 <!-- SKIPPING -protein_fraction_mw_confidence ${processing_options.protein_fraction_mw_confidence} -->
481 </when> 481 </when>