diff macros.xml @ 52:864bd76db767 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 9dc7c9c3ebd64f14c0ce95a0dc190361a90fa4fb
author galaxyp
date Wed, 16 Jan 2019 08:18:39 -0500
parents 66690eb50a32
children
line wrap: on
line diff
--- a/macros.xml	Mon Dec 31 02:20:36 2018 -0500
+++ b/macros.xml	Wed Jan 16 08:18:39 2019 -0500
@@ -1,4 +1,5 @@
 <macros>
+    <import>macros_modifications.xml</import>
     <xml name="stdio">
         <stdio>
             <exit_code range="1:" level="fatal" description="Job Failed" />
@@ -140,17 +141,11 @@
         <section name="protein_modification_options" expanded="false" title="Protein Modification Options">
             <param name="fixed_modifications" type="select" label="Fixed Modifications" multiple="true"
                 help="Occurs in known places on peptide sequence. Hold the appropriate key while clicking to select multiple items">
-                <options from_file="searchgui_mods.loc">
-                    <column name="name" index="0" />
-                    <column name="value" index="0" />
-                </options>
+                <expand macro="modifications"/>
             </param>
             <param name="variable_modifications" type="select" label="Variable Modifications" multiple="true"
-                help="Can occur anywhere on the peptide sequence; adds additional error to search score. Hold the appropriate key while clicking to select multiple items">
-                <options from_file="searchgui_mods.loc">
-                    <column name="name" index="0" />
-                    <column name="value" index="0" />
-                </options>
+                help="Can occur anywhere on the peptide sequence; adds additional error to search score. Hold the appropriate key while clicking to select multiple items">                
+                <expand macro="modifications"/>
             </param>
         </section>