view test-data/peptideshaker_reports_output_psmphosphorylation.tabular @ 56:1beff3ddce58 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit f2f9adb0e2389a95599d651b4eecab6b10244c75"
author galaxyp
date Wed, 20 Jan 2021 13:29:07 +0000
parents bb0130ff73ce
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	Protein(s)	Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Localization Confidence	Probabilistic PTM score	D-score	Confident Phosphosites	#Confident Phosphosites	Ambiguous Phosphosites	#Ambiguous Phosphosites	Confidence [%]	Validation
1	cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3	LDRLISATSISPEHKIDFLFK			searchgui_smallspectra	small.3.3. File:"small.RAW", NativeID:"controllerType=0 controllerNumber=1 scan=3"	0.6731	810.789428710938	2+, 3+, 4+	3	2429.33184573292	0	6.00693871414815					0		0	100.0	Confident
2	cds.comp8310_c0_seq2	NLVAEESMNMLKNK			searchgui_smallspectra	small.17.17. File:"small.RAW", NativeID:"controllerType=0 controllerNumber=1 scan=17"	8.9853	811.408081054688	2+, 3+, 4+	2	1619.80111309327	1	-1.7626881884550694					0		0	100.0	Confident
3	cds.comp41890_c0_seq1	PGGFAKVWANGMGDPNSGDLVWHNKSR			searchgui_smallspectra	small.28.28. File:"small.RAW", NativeID:"controllerType=0 controllerNumber=1 scan=28"	16.3598	725.3583984375	2+, 3+, 4+	4	2896.38272917215	1	6.345261931182815					0		0	100.0	Confident
4	cds.comp41890_c0_seq1_REVERSED	RYTSHEQLEGK			searchgui_smallspectra	small.46.46. File:"small.RAW", NativeID:"controllerType=0 controllerNumber=1 scan=46"	27.6339	674.841369628906	2+, 3+, 4+	2	1346.6578773639	1	5.1562724435666505					0		0	100.0	Confident