Mercurial > repos > galaxyp > peptideshaker
view macros_basic.xml @ 60:a6ff76e057fd draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 62d0c9c13383dc58cc75cd273e0395e53a42b003"
author | galaxyp |
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date | Tue, 20 Jul 2021 08:55:11 +0000 |
parents | 943a34df6047 |
children | 3ec27b4cee7c |
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<macros> <xml name="stdio"> <stdio> <exit_code range="1:" level="fatal" description="Job Failed" /> <regex match="OutOfMemoryError" level="fatal_oom" description="Out of memory"/> <regex match="java.*Exception" level="fatal" description="Java Exception"/> <regex match="Could not reserve enough space for * object heap" level="fatal_oom" description="Out of memory"/> <regex match="Could not create the Java virtual machine" level="fatal" description="JVM Error"/> <regex match="PeptideShaker ran out of memory" level="fatal_oom" description="JVM Error"/> <regex match="CompomicsError" level="fatal" description="Compomics Error"/> </stdio> </xml> <token name="@SEARCHGUI_MAJOR_VERSION@">4</token> <token name="@SEARCHGUI_VERSION@">4.0.41</token> <token name="@SEARCHGUI_VERSION_SUFFIX@">0</token> <token name="@PEPTIDESHAKER_VERSION@">2.0.33</token> <token name="@PEPTIDESHAKER_VERSION_SUFFIX@">1</token> <xml name="citations"> <citations> <citation type="doi">10.1186/1471-2105-12-70</citation> <citation type="doi">10.1002/pmic.201000595</citation> <citation type="doi">doi:10.1038/nbt.3109</citation> </citations> </xml> </macros>