view test-data/peptide_shaker_hierarchical_result2.tabular @ 22:e3be595c0bf5 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 5ca27ef280bee8b65fd3d0d2cd5ff280a2cebb3d
author iracooke
date Fri, 07 Aug 2015 06:55:04 -0400
parents dfaea053e32f
children ad60446b1e93
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	Main Accession	Description	MW [kDa]	Possible Coverage [%]	Coverage [%]	Spectrum Counting NSAF 	Confidently Localized Modification Sites	# Confidently Localized Modification Sites	Ambiguously Localized Modification Sites	#Ambiguously Localized Modification Sites	PI	Secondary Accessions	Protein Group	#Validated Peptides	#Peptides	#Unique	#Validated PSMs	#PSMs	Confidence	Decoy	Validation
1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67		69.88215372568374	92.52	37.58	0.01785479771710408					Related Proteins	cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	15	15	15	40	40	100.0	0	Doubtful
	Protein(s)	Sequence	AAs Before	AAs After	Variable Modifications	Fixed Modifications	Localization Confidence	#Validated PSMs	#PSMs	Confidence	Decoy	Validation
1.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	NLLLDANKENGELK	AK; AK	IS; IS				4	4	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.1.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	NLLLDANKENGELK	NH2-NLLLDANKENGELK-COOH			searchgui_tinyspectra1.mgf	Cmpd 204,  MSn(524.2825), 35.5 min		-1.0	524.28252	3+	3+	1569.8362346836998	0	-6.678342042310128	0				100.0	Doubtful
1.1.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	NLLLDANKENGELK	NH2-NLLLDANKENGELK-COOH			searchgui_tinyspectra1.mgf	Cmpd 207,  MSn(785.9179), 35.7 min		-1.0	785.91791	2+	2+	1569.8362346836998	0	-9.522288910374096	0				100.0	Doubtful
1.1.3	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	NLLLDANKENGELK	NH2-NLLLDANKENGELK-COOH			searchgui_tinyspectra1.mgf	Cmpd 204, +MSn(524.2825), 35.5 min		-1.0	524.28252	3+	3+	1569.8362346836998	0	-6.678342042310128	0				100.0	Doubtful
1.1.4	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	NLLLDANKENGELK	NH2-NLLLDANKENGELK-COOH			searchgui_tinyspectra1.mgf	Cmpd 207, +MSn(785.9179), 35.7 min		-1.0	785.91791	2+	2+	1569.8362346836998	0	-9.522288910374096	0				100.0	Doubtful
1.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ISTGYITENIGGFR	NR; NR	SE; SE				4	4	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.2.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ISTGYITENIGGFR	NH2-ISTGYITENIGGFR-COOH			searchgui_tinyspectra1.mgf	Cmpd 591,  MSn(509.9328), 63.7 min		-1.0	509.93283	3+	3+	1526.7728996836997	0	2.458444778796749	0				100.0	Doubtful
1.2.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ISTGYITENIGGFR	NH2-ISTGYITENIGGFR-COOH			searchgui_tinyspectra1.mgf	Cmpd 588,  MSn(764.3961), 63.5 min		-1.0	764.39611	2+	2+	1526.7728996836997	0	3.1184077735785474	0				100.0	Doubtful
1.2.3	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ISTGYITENIGGFR	NH2-ISTGYITENIGGFR-COOH			searchgui_tinyspectra1.mgf	Cmpd 591, +MSn(509.9328), 63.7 min		-1.0	509.93283	3+	3+	1526.7728996836997	0	2.458444778796749	0				100.0	Doubtful
1.2.4	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ISTGYITENIGGFR	NH2-ISTGYITENIGGFR-COOH			searchgui_tinyspectra1.mgf	Cmpd 588, +MSn(764.3961), 63.5 min		-1.0	764.39611	2+	2+	1526.7728996836997	0	3.1184077735785474	0				100.0	Doubtful
1.3	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	INEDRIDELQDKVNK	AR; AR	LI; LI				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.3.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	INEDRIDELQDKVNK	NH2-INEDRIDELQDKVNK-COOH			searchgui_tinyspectra1.mgf	Cmpd 81,  MSn(610.3171), 27.0 min		-1.0	610.31708	3+	3+	1827.9326546837003	0	-1.7717994436305495	0				100.0	Doubtful
1.3.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	INEDRIDELQDKVNK	NH2-INEDRIDELQDKVNK-COOH			searchgui_tinyspectra1.mgf	Cmpd 81, +MSn(610.3171), 27.0 min		-1.0	610.31708	3+	3+	1827.9326546837003	0	-1.7717994436305495	0				100.0	Doubtful
1.4	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	SHVVGAGLGGGSMGSMNQSMSLHGGR	RR; RR	AS; AS				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.4.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	SHVVGAGLGGGSMGSMNQSMSLHGGR	NH2-SHVVGAGLGGGSMGSMNQSMSLHGGR-COOH			searchgui_tinyspectra1.mgf	Cmpd 220,  MSn(824.3852), 36.3 min		-1.0	824.38516	3+	3+	2470.1263816837	0	2.9391347559636922	0				100.0	Doubtful
1.4.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	SHVVGAGLGGGSMGSMNQSMSLHGGR	NH2-SHVVGAGLGGGSMGSMNQSMSLHGGR-COOH			searchgui_tinyspectra1.mgf	Cmpd 220, +MSn(824.3852), 36.3 min		-1.0	824.38516	3+	3+	2470.1263816837	0	2.9391347559636922	0				100.0	Doubtful
1.5	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ISITTYEEEIEDLHATAR	LK; LK	IN; IN				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.5.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ISITTYEEEIEDLHATAR	NH2-ISITTYEEEIEDLHATAR-COOH			searchgui_tinyspectra1.mgf	Cmpd 752,  MSn(697.6842), 76.3 min		-1.0	697.68418	3+	3+	2090.0167716836995	0	6.659655420038472	0				100.0	Doubtful
1.5.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ISITTYEEEIEDLHATAR	NH2-ISITTYEEEIEDLHATAR-COOH			searchgui_tinyspectra1.mgf	Cmpd 752, +MSn(697.6842), 76.3 min		-1.0	697.68418	3+	3+	2090.0167716836995	0	6.659655420038472	0				100.0	Doubtful
1.6	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	VGNLEEELEFLR	QK; QK	SV; SV				4	4	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.6.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	VGNLEEELEFLR	NH2-VGNLEEELEFLR-COOH			searchgui_tinyspectra1.mgf	Cmpd 871,  MSn(724.3762), 88.9 min		-1.0	724.37624	2+	2+	1446.7354586837	0	1.7038016610019715	0				100.0	Doubtful
1.6.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	VGNLEEELEFLR	NH2-VGNLEEELEFLR-COOH			searchgui_tinyspectra1.mgf	Cmpd 875,  MSn(483.2538), 89.2 min		-1.0	483.25374	3+	3+	1446.7354586837	0	2.7121200881231644	0				100.0	Doubtful
1.6.3	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	VGNLEEELEFLR	NH2-VGNLEEELEFLR-COOH			searchgui_tinyspectra1.mgf	Cmpd 875, +MSn(483.2538), 89.2 min		-1.0	483.25374	3+	3+	1446.7354586837	0	2.7121200881231644	0				100.0	Doubtful
1.6.4	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	VGNLEEELEFLR	NH2-VGNLEEELEFLR-COOH			searchgui_tinyspectra1.mgf	Cmpd 871, +MSn(724.3762), 88.9 min		-1.0	724.37624	2+	2+	1446.7354586837	0	1.7038016610019715	0				100.0	Doubtful
1.7	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	SLQAENEQLR	VR; VR	LK; LK				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.7.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	SLQAENEQLR	NH2-SLQAENEQLR-COOH			searchgui_tinyspectra1.mgf	Cmpd 39,  MSn(594.3056), 25.0 min		-1.0	594.30561	2+	2+	1186.5942146837	0	2.0632379154490605	0				100.0	Doubtful
1.7.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	SLQAENEQLR	NH2-SLQAENEQLR-COOH			searchgui_tinyspectra1.mgf	Cmpd 39, +MSn(594.3056), 25.0 min		-1.0	594.30561	2+	2+	1186.5942146837	0	2.0632379154490605	0				100.0	Doubtful
1.8	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	LHVEMESMIEELQMLMDAK	NK; NK	LS; LS				4	4	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.8.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	LHVEMESMIEELQMLMDAK	NH2-LHVEMESMIEELQMLMDAK-COOH			searchgui_tinyspectra1.mgf	Cmpd 1198,  MSn(1139.0413), 115.6 min		-1.0	1139.04127	2+	2+	2276.0560846836997	0	5.224764535153943	0				100.0	Doubtful
1.8.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	LHVEMESMIEELQMLMDAK	NH2-LHVEMESMIEELQMLMDAK-COOH			searchgui_tinyspectra1.mgf	Cmpd 1197,  MSn(759.6966), 115.6 min		-1.0	759.69661	3+	3+	2276.0560846836997	0	5.228393373659577	0				100.0	Doubtful
1.8.3	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	LHVEMESMIEELQMLMDAK	NH2-LHVEMESMIEELQMLMDAK-COOH			searchgui_tinyspectra1.mgf	Cmpd 1197, +MSn(759.6966), 115.6 min		-1.0	759.69661	3+	3+	2276.0560846836997	0	5.228393373659577	0				100.0	Doubtful
1.8.4	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	LHVEMESMIEELQMLMDAK	NH2-LHVEMESMIEELQMLMDAK-COOH			searchgui_tinyspectra1.mgf	Cmpd 1198, +MSn(1139.0413), 115.6 min		-1.0	1139.04127	2+	2+	2276.0560846836997	0	5.224764535153943	0				100.0	Doubtful
1.9	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	EFDVEPLKEAYQAEIDEAK	RR; RR	NL; NL				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.9.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	EFDVEPLKEAYQAEIDEAK	NH2-EFDVEPLKEAYQAEIDEAK-COOH			searchgui_tinyspectra1.mgf	Cmpd 736,  MSn(742.0258), 75.1 min		-1.0	742.02585	3+	3+	2223.0583016837	0	-1.1594749443833878	0				100.0	Doubtful
1.9.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	EFDVEPLKEAYQAEIDEAK	NH2-EFDVEPLKEAYQAEIDEAK-COOH			searchgui_tinyspectra1.mgf	Cmpd 736, +MSn(742.0258), 75.1 min		-1.0	742.02585	3+	3+	2223.0583016837	0	-1.1594749443833878	0				100.0	Doubtful
1.10	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ASLGMAAGVAGGIATK	GR; GR	DM; DM				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.10.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ASLGMAAGVAGGIATK	NH2-ASLGMAAGVAGGIATK-COOH			searchgui_tinyspectra1.mgf	Cmpd 357,  MSn(687.8723), 46.6 min		-1.0	687.87224	2+	2+	1373.7336876837	0	-2.733506911277659	0				100.0	Doubtful
1.10.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	ASLGMAAGVAGGIATK	NH2-ASLGMAAGVAGGIATK-COOH			searchgui_tinyspectra1.mgf	Cmpd 357, +MSn(687.8723), 46.6 min		-1.0	687.87224	2+	2+	1373.7336876837	0	-2.733506911277659	0				100.0	Doubtful
1.11	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	YESQLSQIR	AR; AR	QS; QS				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.11.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	YESQLSQIR	NH2-YESQLSQIR-COOH			searchgui_tinyspectra1.mgf	Cmpd 67,  MSn(562.2947), 26.3 min		-1.0	562.29468	2+	2+	1122.5669286837	0	7.00561302556395	0				100.0	Doubtful
1.11.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	YESQLSQIR	NH2-YESQLSQIR-COOH			searchgui_tinyspectra1.mgf	Cmpd 67, +MSn(562.2947), 26.3 min		-1.0	562.29468	2+	2+	1122.5669286837	0	7.00561302556395	0				100.0	Doubtful
1.12	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	MEIITITNQLQR	MK; MK	SN; SN				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.12.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	MEIITITNQLQR	NH2-MEIITITNQLQR-COOH			searchgui_tinyspectra1.mgf	Cmpd 636,  MSn(730.3981), 66.9 min		-1.0	730.39814	2+	2+	1458.7864506836997	0	-3.233580283650776	0				100.0	Doubtful
1.12.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	MEIITITNQLQR	NH2-MEIITITNQLQR-COOH			searchgui_tinyspectra1.mgf	Cmpd 636, +MSn(730.3981), 66.9 min		-1.0	730.39814	2+	2+	1458.7864506836997	0	-3.233580283650776	0				100.0	Doubtful
1.13	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67; cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	LISATSISPEHK	DR; DR; DR	ID; ID; ID				4	4	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.13.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67, cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	LISATSISPEHK	NH2-LISATSISPEHK-COOH			searchgui_tinyspectra1.mgf	Cmpd 75,  MSn(641.8547), 26.7 min		-1.0	641.85466	2+	2+	1281.6928656837001	0	1.4811651380377848	0				100.0	Doubtful
1.13.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67, cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	LISATSISPEHK	NH2-LISATSISPEHK-COOH			searchgui_tinyspectra1.mgf	Cmpd 72,  MSn(428.2391), 26.6 min		-1.0	428.23909	3+	3+	1281.6928656837001	0	2.0042705774391996	0				100.0	Doubtful
1.13.3	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67, cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	LISATSISPEHK	NH2-LISATSISPEHK-COOH			searchgui_tinyspectra1.mgf	Cmpd 72, +MSn(428.2391), 26.6 min		-1.0	428.23909	3+	3+	1281.6928656837001	0	2.0042705774391996	0				100.0	Doubtful
1.13.4	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67, cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	LISATSISPEHK	NH2-LISATSISPEHK-COOH			searchgui_tinyspectra1.mgf	Cmpd 75, +MSn(641.8547), 26.7 min		-1.0	641.85466	2+	2+	1281.6928656837001	0	1.4811651380377848	0				100.0	Doubtful
1.14	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67; cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	SVISIGEVESEGQYVTLENTSSGR	SK; SK; SK	SK; SK; SK				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.14.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67, cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	SVISIGEVESEGQYVTLENTSSGR	NH2-SVISIGEVESEGQYVTLENTSSGR-COOH			searchgui_tinyspectra1.mgf	Cmpd 758,  MSn(847.7508), 76.8 min		-1.0	847.75082	3+	3+	2540.2241966836996	0	2.5298047449054923	0				100.0	Doubtful
1.14.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67, cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	SVISIGEVESEGQYVTLENTSSGR	NH2-SVISIGEVESEGQYVTLENTSSGR-COOH			searchgui_tinyspectra1.mgf	Cmpd 758, +MSn(847.7508), 76.8 min		-1.0	847.75082	3+	3+	2540.2241966836996	0	2.5298047449054923	0				100.0	Doubtful
1.15	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67; cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67; cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	KGDIIATVDEWGPVNR	AK; AK; AK	NS; NS; NS				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
1.15.1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67, cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	KGDIIATVDEWGPVNR	NH2-KGDIIATVDEWGPVNR-COOH			searchgui_tinyspectra1.mgf	Cmpd 582,  MSn(590.6452), 63.2 min		-1.0	590.64518	3+	3+	1768.9107986836998	0	1.6433558579610066	0				100.0	Doubtful
1.15.2	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67, cds.comp41779_c0_seq3|m.9435 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 31.94 EValue:4.0e-10	KGDIIATVDEWGPVNR	NH2-KGDIIATVDEWGPVNR-COOH			searchgui_tinyspectra1.mgf	Cmpd 582, +MSn(590.6452), 63.2 min		-1.0	590.64518	3+	3+	1768.9107986836998	0	1.6433558579610066	0				100.0	Doubtful
2	cds.comp52727_c0_seq1|m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91		69.9696370486838	100.0	3.25	0.0032520325203252032					Related Proteins	cds.comp52727_c0_seq2|m.18672 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 35.0 EValue:3.0e-92	cds.comp52727_c0_seq1|m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91, cds.comp52727_c0_seq2|m.18672 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 35.0 EValue:3.0e-92	1	1	1	2	2	100.0	0	Doubtful
	Protein(s)	Sequence	AAs Before	AAs After	Variable Modifications	Fixed Modifications	Localization Confidence	#Validated PSMs	#PSMs	Confidence	Decoy	Validation
2.1	cds.comp52727_c0_seq1|m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91; cds.comp52727_c0_seq2|m.18672 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 35.0 EValue:3.0e-92	EIRDEYDNQLNLLSADLESK	MR; MR	YQ; YQ				2	2	100.0	0	Doubtful
	Protein(s)	Sequence	Modified Sequence	Variable Modifications	Fixed Modifications	Spectrum File	Spectrum Title	Spectrum Scan Number	RT	m/z	Measured Charge	Identification Charge	Theoretical Mass	Isotope Number	Precursor m/z Error [ppm]	Decoy	Localization Confidence	probabilistic PTM score	D-score	Confidence	Validation
2.1.1	cds.comp52727_c0_seq1|m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91, cds.comp52727_c0_seq2|m.18672 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 35.0 EValue:3.0e-92	EIRDEYDNQLNLLSADLESK	NH2-EIRDEYDNQLNLLSADLESK-COOH			searchgui_tinyspectra1.mgf	Cmpd 748,  MSn(789.0604), 76.1 min		-1.0	789.06034	3+	3+	2364.1444886837	0	6.210765906697086	0				100.0	Doubtful
2.1.2	cds.comp52727_c0_seq1|m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91, cds.comp52727_c0_seq2|m.18672 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 35.0 EValue:3.0e-92	EIRDEYDNQLNLLSADLESK	NH2-EIRDEYDNQLNLLSADLESK-COOH			searchgui_tinyspectra1.mgf	Cmpd 748, +MSn(789.0604), 76.1 min		-1.0	789.06034	3+	3+	2364.1444886837	0	6.210765906697086	0				100.0	Doubtful