Mercurial > repos > galaxyp > percolator

comparison test-data/target.mzid @ 0:3a49065a05d6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/percolator commit b4871f9659a924a68430aed3a93f4f9bad733fd6
author galaxyp
date Wed, 07 Dec 2016 16:43:51 -0500
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:3a49065a05d6
1 <?xml version="1.0" encoding="UTF-8"?>
2 <MzIdentML id="MS-GF+" version="1.1.0" xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2016-04-08T12:44:28" >
3 <cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
4 <cv id="PSI-MS" uri="http://psidev.cvs.sourceforge.net/viewvc/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo" version="3.30.0" fullName="PSI-MS"/>
5 <cv id="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" fullName="UNIMOD"/>
6 <cv id="UO" uri="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo" fullName="UNIT-ONTOLOGY"/>
7 </cvList>
8 <AnalysisSoftwareList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
9 <AnalysisSoftware version="Beta (v10072)" name="MS-GF+" id="ID_software">
10 <SoftwareName>
11 <cvParam accession="MS:1002048" cvRef="PSI-MS" name="MS-GF+"/>
12 </SoftwareName>
13 </AnalysisSoftware>
14 </AnalysisSoftwareList>
15 <SequenceCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
16 <DBSequence accession="ENSP00000345809" searchDatabase_ref="SearchDB_1" length="1029" id="DBSeq10385206">
17 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000345809 pep:known chromosome:GRCh38:3:44625040:44644220:1 gene:ENSG00000186448 transcript:ENST00000344387 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
18 </DBSequence>
19 <DBSequence accession="ENSP00000379370" searchDatabase_ref="SearchDB_1" length="1029" id="DBSeq10386678">
20 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000379370 pep:known chromosome:GRCh38:3:44628988:44645262:1 gene:ENSG00000186448 transcript:ENST00000396058 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
21 </DBSequence>
22 <DBSequence accession="ENSP00000485709" searchDatabase_ref="SearchDB_1" length="1029" id="DBSeq37935814">
23 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000485709 pep:known chromosome:GRCh38:CHR_HG2066_PATCH:44625040:44644220:1 gene:ENSG00000281709 transcript:ENST00000628172 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
24 </DBSequence>
25 <DBSequence accession="ENSP00000486739" searchDatabase_ref="SearchDB_1" length="1029" id="DBSeq37937286">
26 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000486739 pep:known chromosome:GRCh38:CHR_HG2066_PATCH:44628988:44645262:1 gene:ENSG00000281709 transcript:ENST00000627845 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
27 </DBSequence>
28 <DBSequence accession="ENSP00000364956" searchDatabase_ref="SearchDB_1" length="1019" id="DBSeq9618118">
29 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000364956 pep:known chromosome:GRCh38:1:15684332:15734769:1 gene:ENSG00000116786 transcript:ENST00000375799 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
30 </DBSequence>
31 <DBSequence accession="ENSP00000364950" searchDatabase_ref="SearchDB_1" length="999" id="DBSeq9619138">
32 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000364950 pep:known chromosome:GRCh38:1:15684390:15734769:1 gene:ENSG00000116786 transcript:ENST00000375793 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
33 </DBSequence>
34 <DBSequence accession="ENSP00000432575" searchDatabase_ref="SearchDB_1" length="213" id="DBSeq34795225">
35 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000432575 pep:putative chromosome:GRCh38:14:24210348:24212704:-1 gene:ENSG00000254505 transcript:ENST00000533011 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
36 </DBSequence>
37 <DBSequence accession="ENSP00000482337" searchDatabase_ref="SearchDB_1" length="735" id="DBSeq741058">
38 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000482337 pep:known chromosome:GRCh38:CHR_HSCHR8_9_CTG1:39588694:39683242:-1 gene:ENSG00000276286 transcript:ENST00000620181 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
39 </DBSequence>
40 <DBSequence accession="ENSP00000484999" searchDatabase_ref="SearchDB_1" length="716" id="DBSeq741794">
41 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000484999 pep:known chromosome:GRCh38:CHR_HSCHR8_9_CTG1:39588694:39683242:-1 gene:ENSG00000276286 transcript:ENST00000613160 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
42 </DBSequence>
43 <DBSequence accession="ENSP00000478636" searchDatabase_ref="SearchDB_1" length="672" id="DBSeq742511">
44 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000478636 pep:known chromosome:GRCh38:CHR_HSCHR8_9_CTG1:39588694:39683242:-1 gene:ENSG00000276286 transcript:ENST00000611998 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
45 </DBSequence>
46 <DBSequence accession="ENSP00000480574" searchDatabase_ref="SearchDB_1" length="579" id="DBSeq743184">
47 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000480574 pep:known chromosome:GRCh38:CHR_HSCHR8_9_CTG1:39588694:39683242:-1 gene:ENSG00000276286 transcript:ENST00000619491 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
48 </DBSequence>
49 <DBSequence accession="ENSP00000343854" searchDatabase_ref="SearchDB_1" length="716" id="DBSeq12892890">
50 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000343854 pep:known chromosome:GRCh38:8:39743735:39838209:-1 gene:ENSG00000104755 transcript:ENST00000347580 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
51 </DBSequence>
52 <DBSequence accession="ENSP00000369182" searchDatabase_ref="SearchDB_1" length="579" id="DBSeq12893607">
53 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000369182 pep:novel chromosome:GRCh38:8:39743735:39838210:-1 gene:ENSG00000104755 transcript:ENST00000379853 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
54 </DBSequence>
55 <DBSequence accession="ENSP00000265708" searchDatabase_ref="SearchDB_1" length="735" id="DBSeq12894187">
56 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000265708 pep:known chromosome:GRCh38:8:39743735:39838289:-1 gene:ENSG00000104755 transcript:ENST00000265708 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
57 </DBSequence>
58 <DBSequence accession="ENSP00000429352" searchDatabase_ref="SearchDB_1" length="672" id="DBSeq12894923">
59 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000429352 pep:novel chromosome:GRCh38:8:39744031:39838227:-1 gene:ENSG00000104755 transcript:ENST00000521880 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
60 </DBSequence>
61 <DBSequence accession="ENSP00000483607" searchDatabase_ref="SearchDB_1" length="672" id="DBSeq12895596">
62 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000483607 pep:known chromosome:GRCh38:8:39743738:39838289:-1 gene:ENSG00000104755 transcript:ENST00000622267 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
63 </DBSequence>
64 <DBSequence accession="ENSP00000220244" searchDatabase_ref="SearchDB_1" length="1361" id="DBSeq15385257">
65 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000220244 pep:known chromosome:GRCh38:15:80779343:80951776:1 gene:ENSG00000103888 transcript:ENST00000220244 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
66 </DBSequence>
67 <DBSequence accession="ENSP00000378177" searchDatabase_ref="SearchDB_1" length="1361" id="DBSeq15386619">
68 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000378177 pep:known chromosome:GRCh38:15:80779371:80951776:1 gene:ENSG00000103888 transcript:ENST00000394685 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
69 </DBSequence>
70 <DBSequence accession="ENSP00000348583" searchDatabase_ref="SearchDB_1" length="1361" id="DBSeq15387981">
71 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000348583 pep:known chromosome:GRCh38:15:80779371:80951776:1 gene:ENSG00000103888 transcript:ENST00000356249 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
72 </DBSequence>
73 <DBSequence accession="ENSP00000480324" searchDatabase_ref="SearchDB_1" length="992" id="DBSeq15389566">
74 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000480324 pep:known chromosome:GRCh38:15:80779395:80949168:1 gene:ENSG00000103888 transcript:ENST00000611615 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
75 </DBSequence>
76 <DBSequence accession="ENSP00000452986" searchDatabase_ref="SearchDB_1" length="417" id="DBSeq27324325">
77 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000452986 pep:known chromosome:GRCh38:15:76994680:77037301:1 gene:ENSG00000140368 transcript:ENST00000559785 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay" name="protein description"/>
78 </DBSequence>
79 <DBSequence accession="ENSP00000452746" searchDatabase_ref="SearchDB_1" length="416" id="DBSeq27324743">
80 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000452746 pep:known chromosome:GRCh38:15:76995085:77037332:1 gene:ENSG00000140368 transcript:ENST00000558012 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
81 </DBSequence>
82 <DBSequence accession="ENSP00000368914" searchDatabase_ref="SearchDB_1" length="413" id="DBSeq27325199">
83 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000368914 pep:novel chromosome:GRCh38:15:76995131:77037331:1 gene:ENSG00000140368 transcript:ENST00000379595 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
84 </DBSequence>
85 <DBSequence accession="ENSP00000453372" searchDatabase_ref="SearchDB_1" length="209" id="DBSeq27325852">
86 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000453372 pep:novel chromosome:GRCh38:15:76995419:77030574:1 gene:ENSG00000140368 transcript:ENST00000559161 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
87 </DBSequence>
88 <DBSequence accession="ENSP00000452743" searchDatabase_ref="SearchDB_1" length="397" id="DBSeq27326062">
89 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000452743 pep:novel chromosome:GRCh38:15:76995574:77037331:1 gene:ENSG00000140368 transcript:ENST00000559295 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
90 </DBSequence>
91 <DBSequence accession="ENSP00000453218" searchDatabase_ref="SearchDB_1" length="145" id="DBSeq27326460">
92 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000453218 pep:putative chromosome:GRCh38:15:77015811:77028598:1 gene:ENSG00000140368 transcript:ENST00000559859 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
93 </DBSequence>
94 <DBSequence accession="ENSP00000295321" searchDatabase_ref="SearchDB_1" length="819" id="DBSeq36382299">
95 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000295321 pep:known chromosome:GRCh38:2:127480806:127526468:-1 gene:ENSG00000163166 transcript:ENST00000295321 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
96 </DBSequence>
97 <DBSequence accession="ENSP00000287598" searchDatabase_ref="SearchDB_1" length="1050" id="DBSeq17447034">
98 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000287598 pep:known chromosome:GRCh38:15:40161026:40221136:1 gene:ENSG00000156970 transcript:ENST00000287598 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
99 </DBSequence>
100 <DBSequence accession="ENSP00000398470" searchDatabase_ref="SearchDB_1" length="1064" id="DBSeq17448182">
101 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000398470 pep:known chromosome:GRCh38:15:40161067:40221038:1 gene:ENSG00000156970 transcript:ENST00000412359 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
102 </DBSequence>
103 <DBSequence accession="ENSP00000373539" searchDatabase_ref="SearchDB_1" length="2551" id="DBSeq1786024">
104 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000373539 pep:known chromosome:GRCh38:12:103587273:103766727:1 gene:ENSG00000136011 transcript:ENST00000388887 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
105 </DBSequence>
106 <DBSequence accession="ENSP00000354117" searchDatabase_ref="SearchDB_1" length="5604" id="DBSeq25732602">
107 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000354117 pep:known chromosome:GRCh38:2:178744405:178807421:-1 gene:ENSG00000155657 transcript:ENST00000360870 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
108 </DBSequence>
109 <DBSequence accession="ENSP00000479605" searchDatabase_ref="SearchDB_1" length="325" id="DBSeq860747">
110 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000479605 pep:known chromosome:GRCh38:CHR_HSCHR17_7_CTG4:38506329:38515530:1 gene:ENSG00000275851 transcript:ENST00000616632 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
111 </DBSequence>
112 <DBSequence accession="ENSP00000477969" searchDatabase_ref="SearchDB_1" length="1093" id="DBSeq861073">
113 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000477969 pep:known chromosome:GRCh38:CHR_HSCHR17_7_CTG4:38506407:38530565:1 gene:ENSG00000275851 transcript:ENST00000618876 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
114 </DBSequence>
115 <DBSequence accession="ENSP00000482928" searchDatabase_ref="SearchDB_1" length="325" id="DBSeq15613646">
116 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000482928 pep:putative chromosome:GRCh38:17:38705542:38714756:1 gene:ENSG00000275023 transcript:ENST00000620609 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
117 </DBSequence>
118 <DBSequence accession="ENSP00000479910" searchDatabase_ref="SearchDB_1" length="1093" id="DBSeq15613972">
119 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000479910 pep:known chromosome:GRCh38:17:38705542:38729803:1 gene:ENSG00000275023 transcript:ENST00000621332 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
120 </DBSequence>
121 <DBSequence accession="ENSP00000379118" searchDatabase_ref="SearchDB_1" length="240" id="DBSeq17708407">
122 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000379118 pep:known chromosome:GRCh38:CHR_HSCHR10_1_CTG2:45473569:45480390:-1 gene:ENSG00000278545 transcript:ENST00000395771 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
123 </DBSequence>
124 <DBSequence accession="ENSP00000411848" searchDatabase_ref="SearchDB_1" length="573" id="DBSeq28038929">
125 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000411848 pep:putative chromosome:GRCh38:10:45454585:45535394:-1 gene:ENSG00000165406 transcript:ENST00000453424 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
126 </DBSequence>
127 <DBSequence accession="ENSP00000379116" searchDatabase_ref="SearchDB_1" length="291" id="DBSeq28039503">
128 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000379116 pep:known chromosome:GRCh38:10:45457506:45535371:-1 gene:ENSG00000165406 transcript:ENST00000395769 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
129 </DBSequence>
130 <DBSequence accession="ENSP00000317087" searchDatabase_ref="SearchDB_1" length="291" id="DBSeq28039885">
131 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000317087 pep:known chromosome:GRCh38:10:45454593:45594906:-1 gene:ENSG00000165406 transcript:ENST00000319836 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
132 </DBSequence>
133 <DBSequence accession="ENSP00000386759" searchDatabase_ref="SearchDB_1" length="2564" id="DBSeq2054501">
134 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000386759 pep:known chromosome:GRCh38:3:47016689:47163967:-1 gene:ENSG00000181555 transcript:ENST00000409792 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
135 </DBSequence>
136 <DBSequence accession="ENSP00000340688" searchDatabase_ref="SearchDB_1" length="1474" id="DBSeq14679837">
137 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000340688 pep:known chromosome:GRCh38:19:14147743:14206187:-1 gene:ENSG00000072071 transcript:ENST00000340736 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
138 </DBSequence>
139 <DBSequence accession="ENSP00000355328" searchDatabase_ref="SearchDB_1" length="1469" id="DBSeq14681312">
140 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000355328 pep:known chromosome:GRCh38:19:14149953:14206169:-1 gene:ENSG00000072071 transcript:ENST00000361434 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
141 </DBSequence>
142 <DBSequence accession="ENSP00000437550" searchDatabase_ref="SearchDB_1" length="1130" id="DBSeq35583698">
143 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000437550 pep:known chromosome:GRCh38:6:149658153:149718256:-1 gene:ENSG00000131023 transcript:ENST00000543571 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
144 </DBSequence>
145 <DBSequence accession="ENSP00000253339" searchDatabase_ref="SearchDB_1" length="1130" id="DBSeq35584829">
146 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000253339 pep:known chromosome:GRCh38:6:149661094:149702354:-1 gene:ENSG00000131023 transcript:ENST00000253339 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
147 </DBSequence>
148 <DBSequence accession="ENSP00000367766" searchDatabase_ref="SearchDB_1" length="1152" id="DBSeq16428957">
149 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="ENSP00000367766 pep:known chromosome:GRCh38:X:38284409:38327544:-1 gene:ENSG00000156313 transcript:ENST00000378505 gene_biotype:protein_coding transcript_biotype:protein_coding" name="protein description"/>
150 </DBSequence>
151 <Peptide id="Pep1">
152 <PeptideSequence>KVSLCERDKKKRTPPEKQGQKWK</PeptideSequence>
153 <Modification monoisotopicMassDelta="229.162932" location="0">
154 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
155 </Modification>
156 <Modification monoisotopicMassDelta="229.162932" location="1">
157 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
158 </Modification>
159 <Modification monoisotopicMassDelta="57.021464" location="5">
160 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
161 </Modification>
162 <Modification monoisotopicMassDelta="229.162932" location="9">
163 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
164 </Modification>
165 <Modification monoisotopicMassDelta="229.162932" location="10">
166 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
167 </Modification>
168 <Modification monoisotopicMassDelta="229.162932" location="11">
169 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
170 </Modification>
171 <Modification monoisotopicMassDelta="229.162932" location="17">
172 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
173 </Modification>
174 <Modification monoisotopicMassDelta="229.162932" location="21">
175 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
176 </Modification>
177 <Modification monoisotopicMassDelta="229.162932" location="23">
178 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
179 </Modification>
180 </Peptide>
181 <Peptide id="Pep2">
182 <PeptideSequence>KKKIGKKK</PeptideSequence>
183 <Modification monoisotopicMassDelta="229.162932" location="0">
184 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
185 </Modification>
186 <Modification monoisotopicMassDelta="229.162932" location="1">
187 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
188 </Modification>
189 <Modification monoisotopicMassDelta="229.162932" location="2">
190 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
191 </Modification>
192 <Modification monoisotopicMassDelta="229.162932" location="3">
193 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
194 </Modification>
195 <Modification monoisotopicMassDelta="229.162932" location="6">
196 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
197 </Modification>
198 <Modification monoisotopicMassDelta="229.162932" location="7">
199 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
200 </Modification>
201 <Modification monoisotopicMassDelta="229.162932" location="8">
202 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
203 </Modification>
204 </Peptide>
205 <Peptide id="Pep3">
206 <PeptideSequence>KKKKLGKK</PeptideSequence>
207 <Modification monoisotopicMassDelta="229.162932" location="0">
208 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
209 </Modification>
210 <Modification monoisotopicMassDelta="229.162932" location="1">
211 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
212 </Modification>
213 <Modification monoisotopicMassDelta="229.162932" location="2">
214 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
215 </Modification>
216 <Modification monoisotopicMassDelta="229.162932" location="3">
217 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
218 </Modification>
219 <Modification monoisotopicMassDelta="229.162932" location="4">
220 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
221 </Modification>
222 <Modification monoisotopicMassDelta="229.162932" location="7">
223 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
224 </Modification>
225 <Modification monoisotopicMassDelta="229.162932" location="8">
226 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
227 </Modification>
228 </Peptide>
229 <Peptide id="Pep4">
230 <PeptideSequence>VNFQRKKWRTEDYSSDEQPESESEPK</PeptideSequence>
231 <Modification monoisotopicMassDelta="229.162932" location="0">
232 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
233 </Modification>
234 <Modification monoisotopicMassDelta="229.162932" location="6">
235 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
236 </Modification>
237 <Modification monoisotopicMassDelta="229.162932" location="7">
238 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
239 </Modification>
240 <Modification monoisotopicMassDelta="229.162932" location="26">
241 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
242 </Modification>
243 </Peptide>
244 <Peptide id="Pep5">
245 <PeptideSequence>DSKMCK</PeptideSequence>
246 <Modification monoisotopicMassDelta="229.162932" location="0">
247 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
248 </Modification>
249 <Modification monoisotopicMassDelta="229.162932" location="3">
250 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
251 </Modification>
252 <Modification monoisotopicMassDelta="15.994915" location="4">
253 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
254 </Modification>
255 <Modification monoisotopicMassDelta="57.021464" location="5">
256 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
257 </Modification>
258 <Modification monoisotopicMassDelta="229.162932" location="6">
259 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
260 </Modification>
261 </Peptide>
262 <Peptide id="Pep6">
263 <PeptideSequence>KKYEAVMDRVQK</PeptideSequence>
264 <Modification monoisotopicMassDelta="229.162932" location="0">
265 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
266 </Modification>
267 <Modification monoisotopicMassDelta="229.162932" location="1">
268 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
269 </Modification>
270 <Modification monoisotopicMassDelta="229.162932" location="2">
271 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
272 </Modification>
273 <Modification monoisotopicMassDelta="15.994915" location="7">
274 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
275 </Modification>
276 <Modification monoisotopicMassDelta="229.162932" location="12">
277 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
278 </Modification>
279 </Peptide>
280 <Peptide id="Pep7">
281 <PeptideSequence>HKQKPESDDDSDRENK</PeptideSequence>
282 <Modification monoisotopicMassDelta="229.162932" location="0">
283 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
284 </Modification>
285 <Modification monoisotopicMassDelta="229.162932" location="2">
286 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
287 </Modification>
288 <Modification monoisotopicMassDelta="229.162932" location="4">
289 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
290 </Modification>
291 <Modification monoisotopicMassDelta="229.162932" location="16">
292 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
293 </Modification>
294 </Peptide>
295 <Peptide id="Pep8">
296 <PeptideSequence>KEKMMYCKEK</PeptideSequence>
297 <Modification monoisotopicMassDelta="229.162932" location="0">
298 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
299 </Modification>
300 <Modification monoisotopicMassDelta="229.162932" location="1">
301 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
302 </Modification>
303 <Modification monoisotopicMassDelta="229.162932" location="3">
304 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
305 </Modification>
306 <Modification monoisotopicMassDelta="57.021464" location="7">
307 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
308 </Modification>
309 <Modification monoisotopicMassDelta="229.162932" location="8">
310 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
311 </Modification>
312 <Modification monoisotopicMassDelta="229.162932" location="10">
313 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
314 </Modification>
315 </Peptide>
316 <Peptide id="Pep9">
317 <PeptideSequence>CNKKCLCVHGTCNNR</PeptideSequence>
318 <Modification monoisotopicMassDelta="229.162932" location="0">
319 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
320 </Modification>
321 <Modification monoisotopicMassDelta="57.021464" location="1">
322 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
323 </Modification>
324 <Modification monoisotopicMassDelta="229.162932" location="3">
325 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
326 </Modification>
327 <Modification monoisotopicMassDelta="229.162932" location="4">
328 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
329 </Modification>
330 <Modification monoisotopicMassDelta="57.021464" location="5">
331 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
332 </Modification>
333 <Modification monoisotopicMassDelta="57.021464" location="7">
334 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
335 </Modification>
336 <Modification monoisotopicMassDelta="57.021464" location="12">
337 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
338 </Modification>
339 </Peptide>
340 <Peptide id="Pep10">
341 <PeptideSequence>KTDYMYDEEYLESK</PeptideSequence>
342 <Modification monoisotopicMassDelta="229.162932" location="0">
343 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
344 </Modification>
345 <Modification monoisotopicMassDelta="229.162932" location="1">
346 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
347 </Modification>
348 <Modification monoisotopicMassDelta="229.162932" location="14">
349 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
350 </Modification>
351 </Peptide>
352 <Peptide id="Pep11">
353 <PeptideSequence>YCGYCKYHFSKMK</PeptideSequence>
354 <Modification monoisotopicMassDelta="229.162932" location="0">
355 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
356 </Modification>
357 <Modification monoisotopicMassDelta="57.021464" location="2">
358 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
359 </Modification>
360 <Modification monoisotopicMassDelta="57.021464" location="5">
361 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
362 </Modification>
363 <Modification monoisotopicMassDelta="229.162932" location="6">
364 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
365 </Modification>
366 <Modification monoisotopicMassDelta="229.162932" location="11">
367 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
368 </Modification>
369 <Modification monoisotopicMassDelta="229.162932" location="13">
370 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
371 </Modification>
372 </Peptide>
373 <Peptide id="Pep12">
374 <PeptideSequence>CCELCKYEFIMETK</PeptideSequence>
375 <Modification monoisotopicMassDelta="229.162932" location="0">
376 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
377 </Modification>
378 <Modification monoisotopicMassDelta="57.021464" location="1">
379 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
380 </Modification>
381 <Modification monoisotopicMassDelta="57.021464" location="2">
382 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
383 </Modification>
384 <Modification monoisotopicMassDelta="57.021464" location="5">
385 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
386 </Modification>
387 <Modification monoisotopicMassDelta="229.162932" location="6">
388 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
389 </Modification>
390 <Modification monoisotopicMassDelta="229.162932" location="14">
391 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
392 </Modification>
393 </Peptide>
394 <Peptide id="Pep13">
395 <PeptideSequence>YCKNPEDLECNENVK</PeptideSequence>
396 <Modification monoisotopicMassDelta="229.162932" location="0">
397 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
398 </Modification>
399 <Modification monoisotopicMassDelta="57.021464" location="2">
400 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
401 </Modification>
402 <Modification monoisotopicMassDelta="229.162932" location="3">
403 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
404 </Modification>
405 <Modification monoisotopicMassDelta="57.021464" location="10">
406 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
407 </Modification>
408 <Modification monoisotopicMassDelta="229.162932" location="15">
409 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
410 </Modification>
411 </Peptide>
412 <Peptide id="Pep14">
413 <PeptideSequence>NHFNANCSFWNYSERSMLGYWSTQGCRLVESNK</PeptideSequence>
414 <Modification monoisotopicMassDelta="229.162932" location="0">
415 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
416 </Modification>
417 <Modification monoisotopicMassDelta="57.021464" location="7">
418 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
419 </Modification>
420 <Modification monoisotopicMassDelta="57.021464" location="26">
421 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
422 </Modification>
423 <Modification monoisotopicMassDelta="229.162932" location="33">
424 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
425 </Modification>
426 </Peptide>
427 <Peptide id="Pep15">
428 <PeptideSequence>QDSMDFSNEWGDPSSCRCGDR</PeptideSequence>
429 <Modification monoisotopicMassDelta="229.162932" location="0">
430 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
431 </Modification>
432 <Modification monoisotopicMassDelta="57.021464" location="16">
433 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
434 </Modification>
435 <Modification monoisotopicMassDelta="57.021464" location="18">
436 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
437 </Modification>
438 </Peptide>
439 <Peptide id="Pep16">
440 <PeptideSequence>NQEMEEGGEEEHGEGEEEEGDR</PeptideSequence>
441 <Modification monoisotopicMassDelta="229.162932" location="0">
442 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
443 </Modification>
444 </Peptide>
445 <PeptideEvidence isDecoy="false" post="E" pre="K" end="345" start="323" peptide_ref="Pep1" dBSequence_ref="DBSeq10385206" id="PepEv_10385528_1_323"/>
446 <PeptideEvidence isDecoy="false" post="E" pre="K" end="345" start="323" peptide_ref="Pep1" dBSequence_ref="DBSeq10386678" id="PepEv_10387000_1_323"/>
447 <PeptideEvidence isDecoy="false" post="E" pre="K" end="345" start="323" peptide_ref="Pep1" dBSequence_ref="DBSeq37935814" id="PepEv_37936136_1_323"/>
448 <PeptideEvidence isDecoy="false" post="E" pre="K" end="345" start="323" peptide_ref="Pep1" dBSequence_ref="DBSeq37937286" id="PepEv_37937608_1_323"/>
449 <PeptideEvidence isDecoy="false" post="K" pre="K" end="325" start="318" peptide_ref="Pep2" dBSequence_ref="DBSeq9618118" id="PepEv_9618435_2_318"/>
450 <PeptideEvidence isDecoy="false" post="K" pre="K" end="305" start="298" peptide_ref="Pep2" dBSequence_ref="DBSeq9619138" id="PepEv_9619435_2_298"/>
451 <PeptideEvidence isDecoy="false" post="E" pre="K" end="23" start="16" peptide_ref="Pep3" dBSequence_ref="DBSeq34795225" id="PepEv_34795240_3_16"/>
452 <PeptideEvidence isDecoy="false" post="G" pre="K" end="734" start="709" peptide_ref="Pep4" dBSequence_ref="DBSeq741058" id="PepEv_741766_4_709"/>
453 <PeptideEvidence isDecoy="false" post="G" pre="K" end="715" start="690" peptide_ref="Pep4" dBSequence_ref="DBSeq741794" id="PepEv_742483_4_690"/>
454 <PeptideEvidence isDecoy="false" post="G" pre="K" end="671" start="646" peptide_ref="Pep4" dBSequence_ref="DBSeq742511" id="PepEv_743156_4_646"/>
455 <PeptideEvidence isDecoy="false" post="G" pre="K" end="578" start="553" peptide_ref="Pep4" dBSequence_ref="DBSeq743184" id="PepEv_743736_4_553"/>
456 <PeptideEvidence isDecoy="false" post="G" pre="K" end="715" start="690" peptide_ref="Pep4" dBSequence_ref="DBSeq12892890" id="PepEv_12893579_4_690"/>
457 <PeptideEvidence isDecoy="false" post="G" pre="K" end="578" start="553" peptide_ref="Pep4" dBSequence_ref="DBSeq12893607" id="PepEv_12894159_4_553"/>
458 <PeptideEvidence isDecoy="false" post="G" pre="K" end="734" start="709" peptide_ref="Pep4" dBSequence_ref="DBSeq12894187" id="PepEv_12894895_4_709"/>
459 <PeptideEvidence isDecoy="false" post="G" pre="K" end="671" start="646" peptide_ref="Pep4" dBSequence_ref="DBSeq12894923" id="PepEv_12895568_4_646"/>
460 <PeptideEvidence isDecoy="false" post="G" pre="K" end="671" start="646" peptide_ref="Pep4" dBSequence_ref="DBSeq12895596" id="PepEv_12896241_4_646"/>
461 <PeptideEvidence isDecoy="false" post="M" pre="R" end="649" start="644" peptide_ref="Pep5" dBSequence_ref="DBSeq15385257" id="PepEv_15385900_5_644"/>
462 <PeptideEvidence isDecoy="false" post="M" pre="R" end="649" start="644" peptide_ref="Pep5" dBSequence_ref="DBSeq15386619" id="PepEv_15387262_5_644"/>
463 <PeptideEvidence isDecoy="false" post="M" pre="R" end="649" start="644" peptide_ref="Pep5" dBSequence_ref="DBSeq15387981" id="PepEv_15388624_5_644"/>
464 <PeptideEvidence isDecoy="false" post="M" pre="R" end="649" start="644" peptide_ref="Pep5" dBSequence_ref="DBSeq15389566" id="PepEv_15390209_5_644"/>
465 <PeptideEvidence isDecoy="false" post="S" pre="R" end="193" start="182" peptide_ref="Pep6" dBSequence_ref="DBSeq27324325" id="PepEv_27324506_6_182"/>
466 <PeptideEvidence isDecoy="false" post="S" pre="R" end="128" start="117" peptide_ref="Pep6" dBSequence_ref="DBSeq27324743" id="PepEv_27324859_6_117"/>
467 <PeptideEvidence isDecoy="false" post="S" pre="R" end="128" start="117" peptide_ref="Pep6" dBSequence_ref="DBSeq27325199" id="PepEv_27325315_6_117"/>
468 <PeptideEvidence isDecoy="false" post="S" pre="R" end="128" start="117" peptide_ref="Pep6" dBSequence_ref="DBSeq27325852" id="PepEv_27325968_6_117"/>
469 <PeptideEvidence isDecoy="false" post="S" pre="R" end="128" start="117" peptide_ref="Pep6" dBSequence_ref="DBSeq27326062" id="PepEv_27326178_6_117"/>
470 <PeptideEvidence isDecoy="false" post="S" pre="R" end="119" start="108" peptide_ref="Pep6" dBSequence_ref="DBSeq27326460" id="PepEv_27326567_6_108"/>
471 <PeptideEvidence isDecoy="false" post="G" pre="R" end="338" start="323" peptide_ref="Pep7" dBSequence_ref="DBSeq36382299" id="PepEv_36382621_7_323"/>
472 <PeptideEvidence isDecoy="false" post="I" pre="K" end="402" start="393" peptide_ref="Pep8" dBSequence_ref="DBSeq17447034" id="PepEv_17447426_8_393"/>
473 <PeptideEvidence isDecoy="false" post="I" pre="K" end="416" start="407" peptide_ref="Pep8" dBSequence_ref="DBSeq17448182" id="PepEv_17448588_8_407"/>
474 <PeptideEvidence isDecoy="false" post="I" pre="R" end="802" start="788" peptide_ref="Pep9" dBSequence_ref="DBSeq1786024" id="PepEv_1786811_9_788"/>
475 <PeptideEvidence isDecoy="false" post="S" pre="K" end="3680" start="3667" peptide_ref="Pep10" dBSequence_ref="DBSeq25732602" id="PepEv_25736268_10_3667"/>
476 <PeptideEvidence isDecoy="false" post="T" pre="K" end="185" start="173" peptide_ref="Pep11" dBSequence_ref="DBSeq860747" id="PepEv_860919_11_173"/>
477 <PeptideEvidence isDecoy="false" post="T" pre="K" end="185" start="173" peptide_ref="Pep11" dBSequence_ref="DBSeq861073" id="PepEv_861245_11_173"/>
478 <PeptideEvidence isDecoy="false" post="T" pre="K" end="185" start="173" peptide_ref="Pep11" dBSequence_ref="DBSeq15613646" id="PepEv_15613818_11_173"/>
479 <PeptideEvidence isDecoy="false" post="T" pre="K" end="185" start="173" peptide_ref="Pep11" dBSequence_ref="DBSeq15613972" id="PepEv_15614144_11_173"/>
480 <PeptideEvidence isDecoy="false" post="L" pre="R" end="84" start="71" peptide_ref="Pep12" dBSequence_ref="DBSeq17708407" id="PepEv_17708477_12_71"/>
481 <PeptideEvidence isDecoy="false" post="L" pre="R" end="417" start="404" peptide_ref="Pep12" dBSequence_ref="DBSeq28038929" id="PepEv_28039332_12_404"/>
482 <PeptideEvidence isDecoy="false" post="L" pre="R" end="135" start="122" peptide_ref="Pep12" dBSequence_ref="DBSeq28039503" id="PepEv_28039624_12_122"/>
483 <PeptideEvidence isDecoy="false" post="L" pre="R" end="135" start="122" peptide_ref="Pep12" dBSequence_ref="DBSeq28039885" id="PepEv_28040006_12_122"/>
484 <PeptideEvidence isDecoy="false" post="H" pre="K" end="2537" start="2523" peptide_ref="Pep13" dBSequence_ref="DBSeq2054501" id="PepEv_2057023_13_2523"/>
485 <PeptideEvidence isDecoy="false" post="T" pre="K" end="828" start="796" peptide_ref="Pep14" dBSequence_ref="DBSeq14679837" id="PepEv_14680632_14_796"/>
486 <PeptideEvidence isDecoy="false" post="T" pre="K" end="823" start="791" peptide_ref="Pep14" dBSequence_ref="DBSeq14681312" id="PepEv_14682102_14_791"/>
487 <PeptideEvidence isDecoy="false" post="L" pre="R" end="890" start="870" peptide_ref="Pep15" dBSequence_ref="DBSeq35583698" id="PepEv_35584567_15_870"/>
488 <PeptideEvidence isDecoy="false" post="L" pre="R" end="890" start="870" peptide_ref="Pep15" dBSequence_ref="DBSeq35584829" id="PepEv_35585698_15_870"/>
489 <PeptideEvidence isDecoy="false" post="E" pre="R" end="745" start="724" peptide_ref="Pep16" dBSequence_ref="DBSeq16428957" id="PepEv_16429680_16_724"/>
490 </SequenceCollection>
491 <AnalysisCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
492 <SpectrumIdentification spectrumIdentificationList_ref="SI_LIST_1" spectrumIdentificationProtocol_ref="SearchProtocol_1" id="SpecIdent_1">
493 <InputSpectra spectraData_ref="SID_1"/>
494 <SearchDatabaseRef searchDatabase_ref="SearchDB_1"/>
495 </SpectrumIdentification>
496 </AnalysisCollection>
497 <AnalysisProtocolCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
498 <SpectrumIdentificationProtocol analysisSoftware_ref="ID_software" id="SearchProtocol_1">
499 <SearchType>
500 <cvParam accession="MS:1001083" cvRef="PSI-MS" name="ms-ms search"/>
501 </SearchType>
502 <AdditionalSearchParams>
503 <cvParam accession="MS:1001211" cvRef="PSI-MS" name="parent mass type mono"/>
504 <cvParam accession="MS:1001256" cvRef="PSI-MS" name="fragment mass type mono"/>
505 <userParam value="false" name="TargetDecoyApproach"/>
506 <userParam value="0" name="MinIsotopeError"/>
507 <userParam value="1" name="MaxIsotopeError"/>
508 <userParam value="HCD" name="FragmentMethod"/>
509 <userParam value="QExactive" name="Instrument"/>
510 <userParam value="TMT" name="Protocol"/>
511 <userParam value="2" name="NumTolerableTermini"/>
512 <userParam value="1" name="NumMatchesPerSpec"/>
513 <userParam value="2" name="MaxNumModifications"/>
514 <userParam value="6" name="MinPepLength"/>
515 <userParam value="50" name="MaxPepLength"/>
516 <userParam value="2" name="MinCharge"/>
517 <userParam value="6" name="MaxCharge"/>
518 </AdditionalSearchParams>
519 <ModificationParams>
520 <SearchModification residues="M" massDelta="15.994915" fixedMod="false">
521 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
522 </SearchModification>
523 <SearchModification residues="C" massDelta="57.021465" fixedMod="true">
524 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
525 </SearchModification>
526 <SearchModification residues="." massDelta="229.16293" fixedMod="true">
527 <SpecificityRules>
528 <cvParam accession="MS:1001189" cvRef="PSI-MS" name="modification specificity N-term"/>
529 </SpecificityRules>
530 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
531 </SearchModification>
532 <SearchModification residues="K" massDelta="229.16293" fixedMod="true">
533 <cvParam accession="UNIMOD:737" cvRef="UNIMOD" name="TMT6plex"/>
534 </SearchModification>
535 </ModificationParams>
536 <Enzymes>
537 <Enzyme missedCleavages="1000" semiSpecific="false" id="Tryp">
538 <EnzymeName>
539 <cvParam accession="MS:1001251" cvRef="PSI-MS" name="Trypsin"/>
540 </EnzymeName>
541 </Enzyme>
542 </Enzymes>
543 <ParentTolerance>
544 <cvParam accession="MS:1001412" cvRef="PSI-MS" unitCvRef="UO" unitName="parts per million" unitAccession="UO:0000169" value="10.0" name="search tolerance plus value"/>
545 <cvParam accession="MS:1001413" cvRef="PSI-MS" unitCvRef="UO" unitName="parts per million" unitAccession="UO:0000169" value="10.0" name="search tolerance minus value"/>
546 </ParentTolerance>
547 <Threshold>
548 <cvParam accession="MS:1001494" cvRef="PSI-MS" name="no threshold"/>
549 </Threshold>
550 </SpectrumIdentificationProtocol>
551 </AnalysisProtocolCollection>
552 <DataCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
553 <Inputs>
554 <SearchDatabase numDatabaseSequences="100778" location="/mnt/galaxy/data/job_working_directory/000/566/dbase.fasta" id="SearchDB_1">
555 <FileFormat>
556 <cvParam accession="MS:1001348" cvRef="PSI-MS" name="FASTA format"/>
557 </FileFormat>
558 <DatabaseName>
559 <userParam name="dbase.fasta"/>
560 </DatabaseName>
561 </SearchDatabase>
562 <SpectraData location="/tmp/tmpzYUATw/dataset_651.dat.mzml" name="dataset_651.dat.mzml" id="SID_1">
563 <FileFormat>
564 <cvParam accession="MS:1000584" cvRef="PSI-MS" name="mzML file"/>
565 </FileFormat>
566 <SpectrumIDFormat>
567 <cvParam accession="MS:1000768" cvRef="PSI-MS" name="Thermo nativeID format"/>
568 </SpectrumIDFormat>
569 </SpectraData>
570 </Inputs>
571 <AnalysisData>
572 <SpectrumIdentificationList id="SI_LIST_1">
573 <FragmentationTable>
574 <Measure id="Measure_MZ">
575 <cvParam accession="MS:1001225" cvRef="PSI-MS" unitCvRef="PSI-MS" unitName="m/z" unitAccession="MS:1000040" name="product ion m/z"/>
576 </Measure>
577 </FragmentationTable>
578 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=114" id="SIR_14">
579 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep1" calculatedMassToCharge="1563.3004150390625" experimentalMassToCharge="1563.2900390625" chargeState="3" id="SII_14_1">
580 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10385528_1_323"/>
581 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10387000_1_323"/>
582 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37936136_1_323"/>
583 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37937608_1_323"/>
584 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-80" name="MS-GF:RawScore"/>
585 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="21" name="MS-GF:DeNovoScore"/>
586 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="8.436431E-9" name="MS-GF:SpecEValue"/>
587 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="0.11343055" name="MS-GF:EValue"/>
588 <userParam value="0" name="IsotopeError"/>
589 <userParam value="HCD" name="AssumedDissociationMethod"/>
590 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
591 <userParam value="0.0" name="NTermIonCurrentRatio"/>
592 <userParam value="0.0" name="CTermIonCurrentRatio"/>
593 <userParam value="35460.188" name="MS2IonCurrent"/>
594 </SpectrumIdentificationItem>
595 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="114" name="scan number(s)"/>
596 </SpectrumIdentificationResult>
597 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=119" id="SIR_19">
598 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep2" calculatedMassToCharge="513.1725463867188" experimentalMassToCharge="513.1763305664062" chargeState="5" id="SII_19_1">
599 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9618435_2_318"/>
600 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9619435_2_298"/>
601 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-14" name="MS-GF:RawScore"/>
602 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="36" name="MS-GF:DeNovoScore"/>
603 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.3967498E-7" name="MS-GF:SpecEValue"/>
604 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="1.6510422" name="MS-GF:EValue"/>
605 <userParam value="0" name="IsotopeError"/>
606 <userParam value="HCD" name="AssumedDissociationMethod"/>
607 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
608 <userParam value="0.0" name="NTermIonCurrentRatio"/>
609 <userParam value="0.0" name="CTermIonCurrentRatio"/>
610 <userParam value="48651.457" name="MS2IonCurrent"/>
611 </SpectrumIdentificationItem>
612 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep3" calculatedMassToCharge="513.1725463867188" experimentalMassToCharge="513.1763305664062" chargeState="5" id="SII_19_2">
613 <PeptideEvidenceRef peptideEvidence_ref="PepEv_34795240_3_16"/>
614 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-14" name="MS-GF:RawScore"/>
615 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="36" name="MS-GF:DeNovoScore"/>
616 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.3967498E-7" name="MS-GF:SpecEValue"/>
617 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="1.6510422" name="MS-GF:EValue"/>
618 <userParam value="0" name="IsotopeError"/>
619 <userParam value="HCD" name="AssumedDissociationMethod"/>
620 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
621 <userParam value="0.0" name="NTermIonCurrentRatio"/>
622 <userParam value="0.0" name="CTermIonCurrentRatio"/>
623 <userParam value="48651.457" name="MS2IonCurrent"/>
624 </SpectrumIdentificationItem>
625 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="119" name="scan number(s)"/>
626 </SpectrumIdentificationResult>
627 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=201" id="SIR_101">
628 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep4" calculatedMassToCharge="1372.7197265625" experimentalMassToCharge="1372.7095947265625" chargeState="3" id="SII_101_1">
629 <PeptideEvidenceRef peptideEvidence_ref="PepEv_741766_4_709"/>
630 <PeptideEvidenceRef peptideEvidence_ref="PepEv_742483_4_690"/>
631 <PeptideEvidenceRef peptideEvidence_ref="PepEv_743156_4_646"/>
632 <PeptideEvidenceRef peptideEvidence_ref="PepEv_743736_4_553"/>
633 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12893579_4_690"/>
634 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12894159_4_553"/>
635 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12894895_4_709"/>
636 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12895568_4_646"/>
637 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12896241_4_646"/>
638 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-72" name="MS-GF:RawScore"/>
639 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="25" name="MS-GF:DeNovoScore"/>
640 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.9978039E-7" name="MS-GF:SpecEValue"/>
641 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="2.7372441" name="MS-GF:EValue"/>
642 <userParam value="0" name="IsotopeError"/>
643 <userParam value="HCD" name="AssumedDissociationMethod"/>
644 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
645 <userParam value="0.0" name="NTermIonCurrentRatio"/>
646 <userParam value="0.0" name="CTermIonCurrentRatio"/>
647 <userParam value="30976.94" name="MS2IonCurrent"/>
648 </SpectrumIdentificationItem>
649 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="201" name="scan number(s)"/>
650 </SpectrumIdentificationResult>
651 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=108" id="SIR_8">
652 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep5" calculatedMassToCharge="491.2787170410156" experimentalMassToCharge="491.2799987792969" chargeState="3" id="SII_8_1">
653 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15385900_5_644"/>
654 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15387262_5_644"/>
655 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15388624_5_644"/>
656 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15390209_5_644"/>
657 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-14" name="MS-GF:RawScore"/>
658 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="2" name="MS-GF:DeNovoScore"/>
659 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="6.6787294E-7" name="MS-GF:SpecEValue"/>
660 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="7.431631" name="MS-GF:EValue"/>
661 <userParam value="0" name="IsotopeError"/>
662 <userParam value="HCD" name="AssumedDissociationMethod"/>
663 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
664 <userParam value="0.0" name="NTermIonCurrentRatio"/>
665 <userParam value="0.0" name="CTermIonCurrentRatio"/>
666 <userParam value="63820.363" name="MS2IonCurrent"/>
667 </SpectrumIdentificationItem>
668 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="108" name="scan number(s)"/>
669 </SpectrumIdentificationResult>
670 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=127" id="SIR_27">
671 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep6" calculatedMassToCharge="1214.2318115234375" experimentalMassToCharge="1214.72705078125" chargeState="2" id="SII_27_1">
672 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27324506_6_182"/>
673 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27324859_6_117"/>
674 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27325315_6_117"/>
675 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27325968_6_117"/>
676 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27326178_6_117"/>
677 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27326567_6_108"/>
678 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-43" name="MS-GF:RawScore"/>
679 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="10" name="MS-GF:DeNovoScore"/>
680 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="6.880694E-7" name="MS-GF:SpecEValue"/>
681 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="8.513171" name="MS-GF:EValue"/>
682 <userParam value="1" name="IsotopeError"/>
683 <userParam value="HCD" name="AssumedDissociationMethod"/>
684 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
685 <userParam value="0.0" name="NTermIonCurrentRatio"/>
686 <userParam value="0.0" name="CTermIonCurrentRatio"/>
687 <userParam value="23307.105" name="MS2IonCurrent"/>
688 </SpectrumIdentificationItem>
689 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="127" name="scan number(s)"/>
690 </SpectrumIdentificationResult>
691 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=164" id="SIR_64">
692 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep7" calculatedMassToCharge="948.8466796875" experimentalMassToCharge="948.8460083007812" chargeState="3" id="SII_64_1">
693 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36382621_7_323"/>
694 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-45" name="MS-GF:RawScore"/>
695 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="24" name="MS-GF:DeNovoScore"/>
696 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.0382666E-6" name="MS-GF:SpecEValue"/>
697 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="13.290904" name="MS-GF:EValue"/>
698 <userParam value="0" name="IsotopeError"/>
699 <userParam value="HCD" name="AssumedDissociationMethod"/>
700 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
701 <userParam value="0.0" name="NTermIonCurrentRatio"/>
702 <userParam value="0.0" name="CTermIonCurrentRatio"/>
703 <userParam value="31451.035" name="MS2IonCurrent"/>
704 </SpectrumIdentificationItem>
705 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="164" name="scan number(s)"/>
706 </SpectrumIdentificationResult>
707 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=161" id="SIR_61">
708 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep8" calculatedMassToCharge="1260.7398681640625" experimentalMassToCharge="1260.72998046875" chargeState="2" id="SII_61_1">
709 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17447426_8_393"/>
710 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17448588_8_407"/>
711 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-48" name="MS-GF:RawScore"/>
712 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="1" name="MS-GF:DeNovoScore"/>
713 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.1092305E-6" name="MS-GF:SpecEValue"/>
714 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="13.446476" name="MS-GF:EValue"/>
715 <userParam value="0" name="IsotopeError"/>
716 <userParam value="HCD" name="AssumedDissociationMethod"/>
717 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
718 <userParam value="0.0" name="NTermIonCurrentRatio"/>
719 <userParam value="0.0" name="CTermIonCurrentRatio"/>
720 <userParam value="30739.516" name="MS2IonCurrent"/>
721 </SpectrumIdentificationItem>
722 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="161" name="scan number(s)"/>
723 </SpectrumIdentificationResult>
724 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=156" id="SIR_56">
725 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep9" calculatedMassToCharge="1304.66845703125" experimentalMassToCharge="1304.6722412109375" chargeState="2" id="SII_56_1">
726 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1786811_9_788"/>
727 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-54" name="MS-GF:RawScore"/>
728 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="4" name="MS-GF:DeNovoScore"/>
729 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="2.1190979E-6" name="MS-GF:SpecEValue"/>
730 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="26.91272" name="MS-GF:EValue"/>
731 <userParam value="0" name="IsotopeError"/>
732 <userParam value="HCD" name="AssumedDissociationMethod"/>
733 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
734 <userParam value="0.0" name="NTermIonCurrentRatio"/>
735 <userParam value="0.0" name="CTermIonCurrentRatio"/>
736 <userParam value="23753.205" name="MS2IonCurrent"/>
737 </SpectrumIdentificationItem>
738 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="156" name="scan number(s)"/>
739 </SpectrumIdentificationResult>
740 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=103" id="SIR_3">
741 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep10" calculatedMassToCharge="1251.139892578125" experimentalMassToCharge="1251.6300048828125" chargeState="2" id="SII_3_1">
742 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25736268_10_3667"/>
743 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-47" name="MS-GF:RawScore"/>
744 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="25" name="MS-GF:DeNovoScore"/>
745 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.1753857E-5" name="MS-GF:SpecEValue"/>
746 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="148.04964" name="MS-GF:EValue"/>
747 <userParam value="1" name="IsotopeError"/>
748 <userParam value="HCD" name="AssumedDissociationMethod"/>
749 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
750 <userParam value="0.0" name="NTermIonCurrentRatio"/>
751 <userParam value="0.0" name="CTermIonCurrentRatio"/>
752 <userParam value="28221.162" name="MS2IonCurrent"/>
753 </SpectrumIdentificationItem>
754 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="103" name="scan number(s)"/>
755 </SpectrumIdentificationResult>
756 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=170" id="SIR_70">
757 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep11" calculatedMassToCharge="1344.7171630859375" experimentalMassToCharge="1344.721923828125" chargeState="2" id="SII_70_1">
758 <PeptideEvidenceRef peptideEvidence_ref="PepEv_860919_11_173"/>
759 <PeptideEvidenceRef peptideEvidence_ref="PepEv_861245_11_173"/>
760 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15613818_11_173"/>
761 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15614144_11_173"/>
762 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-68" name="MS-GF:RawScore"/>
763 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="0" name="MS-GF:DeNovoScore"/>
764 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.6623011E-5" name="MS-GF:SpecEValue"/>
765 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="207.56848" name="MS-GF:EValue"/>
766 <userParam value="0" name="IsotopeError"/>
767 <userParam value="HCD" name="AssumedDissociationMethod"/>
768 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
769 <userParam value="0.0" name="NTermIonCurrentRatio"/>
770 <userParam value="0.0" name="CTermIonCurrentRatio"/>
771 <userParam value="25516.688" name="MS2IonCurrent"/>
772 </SpectrumIdentificationItem>
773 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="170" name="scan number(s)"/>
774 </SpectrumIdentificationResult>
775 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=199" id="SIR_99">
776 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep12" calculatedMassToCharge="1299.65576171875" experimentalMassToCharge="1300.1600341796875" chargeState="2" id="SII_99_1">
777 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17708477_12_71"/>
778 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28039332_12_404"/>
779 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28039624_12_122"/>
780 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28040006_12_122"/>
781 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-63" name="MS-GF:RawScore"/>
782 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="5" name="MS-GF:DeNovoScore"/>
783 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.8922674E-5" name="MS-GF:SpecEValue"/>
784 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="238.34686" name="MS-GF:EValue"/>
785 <userParam value="1" name="IsotopeError"/>
786 <userParam value="HCD" name="AssumedDissociationMethod"/>
787 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
788 <userParam value="0.0" name="NTermIonCurrentRatio"/>
789 <userParam value="0.0" name="CTermIonCurrentRatio"/>
790 <userParam value="31783.168" name="MS2IonCurrent"/>
791 </SpectrumIdentificationItem>
792 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep13" calculatedMassToCharge="1300.1585693359375" experimentalMassToCharge="1300.1600341796875" chargeState="2" id="SII_99_2">
793 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2057023_13_2523"/>
794 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-63" name="MS-GF:RawScore"/>
795 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="5" name="MS-GF:DeNovoScore"/>
796 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.8922674E-5" name="MS-GF:SpecEValue"/>
797 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="240.31953" name="MS-GF:EValue"/>
798 <userParam value="0" name="IsotopeError"/>
799 <userParam value="HCD" name="AssumedDissociationMethod"/>
800 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
801 <userParam value="0.0" name="NTermIonCurrentRatio"/>
802 <userParam value="0.0" name="CTermIonCurrentRatio"/>
803 <userParam value="31783.168" name="MS2IonCurrent"/>
804 </SpectrumIdentificationItem>
805 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="199" name="scan number(s)"/>
806 </SpectrumIdentificationResult>
807 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=180" id="SIR_80">
808 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep14" calculatedMassToCharge="1501.04052734375" experimentalMassToCharge="1501.3699951171875" chargeState="3" id="SII_80_1">
809 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14680632_14_796"/>
810 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14682102_14_791"/>
811 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-120" name="MS-GF:RawScore"/>
812 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="22" name="MS-GF:DeNovoScore"/>
813 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.509051E-4" name="MS-GF:SpecEValue"/>
814 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="2153.8662" name="MS-GF:EValue"/>
815 <userParam value="1" name="IsotopeError"/>
816 <userParam value="HCD" name="AssumedDissociationMethod"/>
817 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
818 <userParam value="0.0" name="NTermIonCurrentRatio"/>
819 <userParam value="0.0" name="CTermIonCurrentRatio"/>
820 <userParam value="35867.156" name="MS2IonCurrent"/>
821 </SpectrumIdentificationItem>
822 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="180" name="scan number(s)"/>
823 </SpectrumIdentificationResult>
824 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=110" id="SIR_10">
825 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep15" calculatedMassToCharge="1368.0577392578125" experimentalMassToCharge="1368.0465087890625" chargeState="2" id="SII_10_1">
826 <PeptideEvidenceRef peptideEvidence_ref="PepEv_35584567_15_870"/>
827 <PeptideEvidenceRef peptideEvidence_ref="PepEv_35585698_15_870"/>
828 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-113" name="MS-GF:RawScore"/>
829 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="13" name="MS-GF:DeNovoScore"/>
830 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0051470893" name="MS-GF:SpecEValue"/>
831 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="68299.03" name="MS-GF:EValue"/>
832 <userParam value="0" name="IsotopeError"/>
833 <userParam value="HCD" name="AssumedDissociationMethod"/>
834 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
835 <userParam value="0.0" name="NTermIonCurrentRatio"/>
836 <userParam value="0.0" name="CTermIonCurrentRatio"/>
837 <userParam value="30227.537" name="MS2IonCurrent"/>
838 </SpectrumIdentificationItem>
839 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep16" calculatedMassToCharge="1367.54638671875" experimentalMassToCharge="1368.0465087890625" chargeState="2" id="SII_10_2">
840 <PeptideEvidenceRef peptideEvidence_ref="PepEv_16429680_16_724"/>
841 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-113" name="MS-GF:RawScore"/>
842 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="13" name="MS-GF:DeNovoScore"/>
843 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0051470893" name="MS-GF:SpecEValue"/>
844 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="68754.73" name="MS-GF:EValue"/>
845 <userParam value="1" name="IsotopeError"/>
846 <userParam value="HCD" name="AssumedDissociationMethod"/>
847 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
848 <userParam value="0.0" name="NTermIonCurrentRatio"/>
849 <userParam value="0.0" name="CTermIonCurrentRatio"/>
850 <userParam value="30227.537" name="MS2IonCurrent"/>
851 </SpectrumIdentificationItem>
852 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="110" name="scan number(s)"/>
853 </SpectrumIdentificationResult>
854 </SpectrumIdentificationList>
855 </AnalysisData>
856 </DataCollection>
857 </MzIdentML>