Mercurial > repos > galaxyp > percolator

comparison test-data/target_ds3_withperco.mzid @ 2:7a0951d0e13e draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/percolator commit 4ca7fcd1587c906db3314048a223d23b63b3f038
author galaxyp
date Fri, 10 Mar 2017 03:20:52 -0500
parents 86770eea5b09
children
comparison
equal deleted inserted replaced
1:86770eea5b09 2:7a0951d0e13e
123 <userParam value="4.7648582" name="StdevErrorTop7"/> 123 <userParam value="4.7648582" name="StdevErrorTop7"/>
124 <userParam value="0.79569435" name="MeanRelErrorAll"/> 124 <userParam value="0.79569435" name="MeanRelErrorAll"/>
125 <userParam value="9.273238" name="StdevRelErrorAll"/> 125 <userParam value="9.273238" name="StdevRelErrorAll"/>
126 <userParam value="0.79569435" name="MeanRelErrorTop7"/> 126 <userParam value="0.79569435" name="MeanRelErrorTop7"/>
127 <userParam value="9.273238" name="StdevRelErrorTop7"/> 127 <userParam value="9.273238" name="StdevRelErrorTop7"/>
128 <userParam name="percolator:score" value="-0.996"/>
129 <userParam name="percolator:psm_p_value" value="0.000e+00"/>
130 <userParam name="percolator:psm_q_value" value="1.000e+00"/>
131 <userParam name="percolator:psm_pep" value="1.000e+00"/>
132 <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
133 <userParam name="percolator:peptide_pep" value="1.000e+00"/>
128 </SpectrumIdentificationItem> 134 </SpectrumIdentificationItem>
129 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9576" name="scan number(s)"/> 135 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9576" name="scan number(s)"/>
130 </SpectrumIdentificationResult> 136 </SpectrumIdentificationResult>
131 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9739" id="SIR_240"> 137 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9739" id="SIR_240">
132 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep363" calculatedMassToCharge="1044.435546875" experimentalMassToCharge="1045.4466552734375" chargeState="2" id="SII_240_1"> 138 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep363" calculatedMassToCharge="1044.435546875" experimentalMassToCharge="1045.4466552734375" chargeState="2" id="SII_240_1">
184 <userParam value="2.0159998" name="StdevErrorTop7"/> 190 <userParam value="2.0159998" name="StdevErrorTop7"/>
185 <userParam value="-12.467069" name="MeanRelErrorAll"/> 191 <userParam value="-12.467069" name="MeanRelErrorAll"/>
186 <userParam value="2.0159998" name="StdevRelErrorAll"/> 192 <userParam value="2.0159998" name="StdevRelErrorAll"/>
187 <userParam value="-12.467069" name="MeanRelErrorTop7"/> 193 <userParam value="-12.467069" name="MeanRelErrorTop7"/>
188 <userParam value="2.0159998" name="StdevRelErrorTop7"/> 194 <userParam value="2.0159998" name="StdevRelErrorTop7"/>
195 <userParam name="percolator:score" value="-1.105"/>
196 <userParam name="percolator:psm_p_value" value="0.000e+00"/>
197 <userParam name="percolator:psm_q_value" value="1.000e+00"/>
198 <userParam name="percolator:psm_pep" value="1.000e+00"/>
199 <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
200 <userParam name="percolator:peptide_pep" value="1.000e+00"/>
189 </SpectrumIdentificationItem> 201 </SpectrumIdentificationItem>
190 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9624" name="scan number(s)"/> 202 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9624" name="scan number(s)"/>
191 </SpectrumIdentificationResult> 203 </SpectrumIdentificationResult>
192 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9597" id="SIR_98"> 204 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9597" id="SIR_98">
193 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep365" calculatedMassToCharge="374.7237548828125" experimentalMassToCharge="375.2268981933594" chargeState="2" id="SII_98_1"> 205 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep365" calculatedMassToCharge="374.7237548828125" experimentalMassToCharge="375.2268981933594" chargeState="2" id="SII_98_1">
215 <userParam value="6.174447" name="StdevErrorTop7"/> 227 <userParam value="6.174447" name="StdevErrorTop7"/>
216 <userParam value="-10.314375" name="MeanRelErrorAll"/> 228 <userParam value="-10.314375" name="MeanRelErrorAll"/>
217 <userParam value="6.908051" name="StdevRelErrorAll"/> 229 <userParam value="6.908051" name="StdevRelErrorAll"/>
218 <userParam value="-10.314375" name="MeanRelErrorTop7"/> 230 <userParam value="-10.314375" name="MeanRelErrorTop7"/>
219 <userParam value="6.908051" name="StdevRelErrorTop7"/> 231 <userParam value="6.908051" name="StdevRelErrorTop7"/>
232 <userParam name="percolator:score" value="-1.122"/>
233 <userParam name="percolator:psm_p_value" value="0.000e+00"/>
234 <userParam name="percolator:psm_q_value" value="1.000e+00"/>
235 <userParam name="percolator:psm_pep" value="1.000e+00"/>
236 <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
237 <userParam name="percolator:peptide_pep" value="1.000e+00"/>
220 </SpectrumIdentificationItem> 238 </SpectrumIdentificationItem>
221 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9597" name="scan number(s)"/> 239 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9597" name="scan number(s)"/>
222 </SpectrumIdentificationResult> 240 </SpectrumIdentificationResult>
223 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9535" id="SIR_36"> 241 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9535" id="SIR_36">
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264 <userParam value="0.0" name="StdevErrorTop7"/> 282 <userParam value="0.0" name="StdevErrorTop7"/>
265 <userParam value="7.1771297" name="MeanRelErrorAll"/> 283 <userParam value="7.1771297" name="MeanRelErrorAll"/>
266 <userParam value="0.0" name="StdevRelErrorAll"/> 284 <userParam value="0.0" name="StdevRelErrorAll"/>
267 <userParam value="7.1771297" name="MeanRelErrorTop7"/> 285 <userParam value="7.1771297" name="MeanRelErrorTop7"/>
268 <userParam value="0.0" name="StdevRelErrorTop7"/> 286 <userParam value="0.0" name="StdevRelErrorTop7"/>
269 <userParam name="percolator:score" value="-1.307"/> 287 <userParam name="percolator:score" value="-1.13"/>
270 <userParam name="percolator:psm_p_value" value="8.449e-01"/> 288 <userParam name="percolator:psm_p_value" value="0.000e+00"/>
271 <userParam name="percolator:psm_q_value" value="1.000e+00"/> 289 <userParam name="percolator:psm_q_value" value="1.000e+00"/>
272 <userParam name="percolator:psm_pep" value="1.000e+00"/> 290 <userParam name="percolator:psm_pep" value="1.000e+00"/>
273 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> 291 <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
274 <userParam name="percolator:peptide_pep" value="1.000e+00"/> 292 <userParam name="percolator:peptide_pep" value="1.000e+00"/>
275 </SpectrumIdentificationItem> 293 </SpectrumIdentificationItem>
320 <userParam value="3.3916576" name="StdevErrorTop7"/> 338 <userParam value="3.3916576" name="StdevErrorTop7"/>
321 <userParam value="-3.5387955" name="MeanRelErrorAll"/> 339 <userParam value="-3.5387955" name="MeanRelErrorAll"/>
322 <userParam value="6.8804927" name="StdevRelErrorAll"/> 340 <userParam value="6.8804927" name="StdevRelErrorAll"/>
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324 <userParam value="6.8804927" name="StdevRelErrorTop7"/> 342 <userParam value="6.8804927" name="StdevRelErrorTop7"/>
325 <userParam name="percolator:score" value="-1.42"/> 343 <userParam name="percolator:score" value="-1.144"/>
326 <userParam name="percolator:psm_p_value" value="9.186e-01"/> 344 <userParam name="percolator:psm_p_value" value="0.000e+00"/>
327 <userParam name="percolator:psm_q_value" value="1.000e+00"/> 345 <userParam name="percolator:psm_q_value" value="1.000e+00"/>
328 <userParam name="percolator:psm_pep" value="1.000e+00"/> 346 <userParam name="percolator:psm_pep" value="1.000e+00"/>
329 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> 347 <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
330 <userParam name="percolator:peptide_pep" value="1.000e+00"/> 348 <userParam name="percolator:peptide_pep" value="1.000e+00"/>
331 </SpectrumIdentificationItem> 349 </SpectrumIdentificationItem>
354 <userParam value="3.8946548" name="StdevErrorTop7"/> 372 <userParam value="3.8946548" name="StdevErrorTop7"/>
355 <userParam value="-2.0970254" name="MeanRelErrorAll"/> 373 <userParam value="-2.0970254" name="MeanRelErrorAll"/>
356 <userParam value="7.9635553" name="StdevRelErrorAll"/> 374 <userParam value="7.9635553" name="StdevRelErrorAll"/>
357 <userParam value="-2.0970254" name="MeanRelErrorTop7"/> 375 <userParam value="-2.0970254" name="MeanRelErrorTop7"/>
358 <userParam value="7.9635553" name="StdevRelErrorTop7"/> 376 <userParam value="7.9635553" name="StdevRelErrorTop7"/>
377 <userParam name="percolator:score" value="-1.153"/>
378 <userParam name="percolator:psm_p_value" value="0.000e+00"/>
379 <userParam name="percolator:psm_q_value" value="1.000e+00"/>
380 <userParam name="percolator:psm_pep" value="1.000e+00"/>
381 <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
382 <userParam name="percolator:peptide_pep" value="1.000e+00"/>
359 </SpectrumIdentificationItem> 383 </SpectrumIdentificationItem>
360 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9594" name="scan number(s)"/> 384 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9594" name="scan number(s)"/>
361 </SpectrumIdentificationResult> 385 </SpectrumIdentificationResult>
362 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9681" id="SIR_182"> 386 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9681" id="SIR_182">
363 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep371" calculatedMassToCharge="388.7393798828125" experimentalMassToCharge="389.2425537109375" chargeState="2" id="SII_182_1"> 387 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep371" calculatedMassToCharge="388.7393798828125" experimentalMassToCharge="389.2425537109375" chargeState="2" id="SII_182_1">
382 <userParam value="1.2990792" name="StdevErrorTop7"/> 406 <userParam value="1.2990792" name="StdevErrorTop7"/>
383 <userParam value="-9.696182" name="MeanRelErrorAll"/> 407 <userParam value="-9.696182" name="MeanRelErrorAll"/>
384 <userParam value="1.2990792" name="StdevRelErrorAll"/> 408 <userParam value="1.2990792" name="StdevRelErrorAll"/>
385 <userParam value="-9.696182" name="MeanRelErrorTop7"/> 409 <userParam value="-9.696182" name="MeanRelErrorTop7"/>
386 <userParam value="1.2990792" name="StdevRelErrorTop7"/> 410 <userParam value="1.2990792" name="StdevRelErrorTop7"/>
411 <userParam name="percolator:score" value="-1.202"/>
412 <userParam name="percolator:psm_p_value" value="0.000e+00"/>
413 <userParam name="percolator:psm_q_value" value="1.000e+00"/>
414 <userParam name="percolator:psm_pep" value="1.000e+00"/>
415 <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
416 <userParam name="percolator:peptide_pep" value="1.000e+00"/>
387 </SpectrumIdentificationItem> 417 </SpectrumIdentificationItem>
388 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9681" name="scan number(s)"/> 418 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9681" name="scan number(s)"/>
389 </SpectrumIdentificationResult> 419 </SpectrumIdentificationResult>
390 </SpectrumIdentificationList> 420 </SpectrumIdentificationList>
391 </AnalysisData> 421 </AnalysisData>