diff test-data/target_ds3_withperco.mzid @ 2:7a0951d0e13e draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/percolator commit 4ca7fcd1587c906db3314048a223d23b63b3f038
author galaxyp
date Fri, 10 Mar 2017 03:20:52 -0500
parents 86770eea5b09
children
line wrap: on
line diff
--- a/test-data/target_ds3_withperco.mzid	Sat Mar 04 20:36:03 2017 -0500
+++ b/test-data/target_ds3_withperco.mzid	Fri Mar 10 03:20:52 2017 -0500
@@ -125,6 +125,12 @@
                     <userParam value="9.273238" name="StdevRelErrorAll"/>
                     <userParam value="0.79569435" name="MeanRelErrorTop7"/>
                     <userParam value="9.273238" name="StdevRelErrorTop7"/>
+                    <userParam name="percolator:score" value="-0.996"/>
+                    <userParam name="percolator:psm_p_value" value="0.000e+00"/>
+                    <userParam name="percolator:psm_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:psm_pep" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_pep" value="1.000e+00"/>
                 </SpectrumIdentificationItem>
                 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9576" name="scan number(s)"/>
             </SpectrumIdentificationResult>
@@ -186,6 +192,12 @@
                     <userParam value="2.0159998" name="StdevRelErrorAll"/>
                     <userParam value="-12.467069" name="MeanRelErrorTop7"/>
                     <userParam value="2.0159998" name="StdevRelErrorTop7"/>
+                    <userParam name="percolator:score" value="-1.105"/>
+                    <userParam name="percolator:psm_p_value" value="0.000e+00"/>
+                    <userParam name="percolator:psm_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:psm_pep" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_pep" value="1.000e+00"/>
                 </SpectrumIdentificationItem>
                 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9624" name="scan number(s)"/>
             </SpectrumIdentificationResult>
@@ -217,6 +229,12 @@
                     <userParam value="6.908051" name="StdevRelErrorAll"/>
                     <userParam value="-10.314375" name="MeanRelErrorTop7"/>
                     <userParam value="6.908051" name="StdevRelErrorTop7"/>
+                    <userParam name="percolator:score" value="-1.122"/>
+                    <userParam name="percolator:psm_p_value" value="0.000e+00"/>
+                    <userParam name="percolator:psm_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:psm_pep" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_pep" value="1.000e+00"/>
                 </SpectrumIdentificationItem>
                 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9597" name="scan number(s)"/>
             </SpectrumIdentificationResult>
@@ -266,8 +284,8 @@
                     <userParam value="0.0" name="StdevRelErrorAll"/>
                     <userParam value="7.1771297" name="MeanRelErrorTop7"/>
                     <userParam value="0.0" name="StdevRelErrorTop7"/>
-                    <userParam name="percolator:score" value="-1.307"/>
-                    <userParam name="percolator:psm_p_value" value="8.449e-01"/>
+                    <userParam name="percolator:score" value="-1.13"/>
+                    <userParam name="percolator:psm_p_value" value="0.000e+00"/>
                     <userParam name="percolator:psm_q_value" value="1.000e+00"/>
                     <userParam name="percolator:psm_pep" value="1.000e+00"/>
                     <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
@@ -322,8 +340,8 @@
                     <userParam value="6.8804927" name="StdevRelErrorAll"/>
                     <userParam value="-3.5387955" name="MeanRelErrorTop7"/>
                     <userParam value="6.8804927" name="StdevRelErrorTop7"/>
-                    <userParam name="percolator:score" value="-1.42"/>
-                    <userParam name="percolator:psm_p_value" value="9.186e-01"/>
+                    <userParam name="percolator:score" value="-1.144"/>
+                    <userParam name="percolator:psm_p_value" value="0.000e+00"/>
                     <userParam name="percolator:psm_q_value" value="1.000e+00"/>
                     <userParam name="percolator:psm_pep" value="1.000e+00"/>
                     <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
@@ -356,6 +374,12 @@
                     <userParam value="7.9635553" name="StdevRelErrorAll"/>
                     <userParam value="-2.0970254" name="MeanRelErrorTop7"/>
                     <userParam value="7.9635553" name="StdevRelErrorTop7"/>
+                    <userParam name="percolator:score" value="-1.153"/>
+                    <userParam name="percolator:psm_p_value" value="0.000e+00"/>
+                    <userParam name="percolator:psm_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:psm_pep" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_pep" value="1.000e+00"/>
                 </SpectrumIdentificationItem>
                 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9594" name="scan number(s)"/>
             </SpectrumIdentificationResult>
@@ -384,6 +408,12 @@
                     <userParam value="1.2990792" name="StdevRelErrorAll"/>
                     <userParam value="-9.696182" name="MeanRelErrorTop7"/>
                     <userParam value="1.2990792" name="StdevRelErrorTop7"/>
+                    <userParam name="percolator:score" value="-1.202"/>
+                    <userParam name="percolator:psm_p_value" value="0.000e+00"/>
+                    <userParam name="percolator:psm_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:psm_pep" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_q_value" value="1.000e+00"/>
+                    <userParam name="percolator:peptide_pep" value="1.000e+00"/>
                 </SpectrumIdentificationItem>
                 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9681" name="scan number(s)"/>
             </SpectrumIdentificationResult>