# HG changeset patch
# User Jim Johnson <jj@umn.edu>
# Date 1413838473 18000
# Node ID ffbfff887a03c548df02775268ef886a032bd81b
# Parent  b3cf7d7dadc123a41eb2e98778af76301b3afb12
Change params named "type" to something that won't confuse galaxy.

diff -r b3cf7d7dadc1 -r ffbfff887a03 proteinpilot_tabular.xml
--- a/proteinpilot_tabular.xml	Tue Sep 30 10:45:56 2014 -0400
+++ b/proteinpilot_tabular.xml	Mon Oct 20 15:54:33 2014 -0500
@@ -3,22 +3,22 @@
   <!-- TOOD: Implement wrapper allowing Windows newlines to be replaced. -->
   <command>
     #if $quant.use
-    #set $denom = $quant.type
+    #set $denom = $quant.dtype
     #else
     #set $denom = ""
     #end if
-    group2xml.exe ${type} $input $output $denom
+    group2xml.exe ${ptype} $input $output $denom
   </command>
   <inputs>
     <param format="group" name="input" type="data" label="ProteinPilot Group Data" help=""/>
-    <param name="type" type="select" label="Summary Type">
+    <param name="ptype" type="select" label="Summary Type">
       <option value="PROTEIN">Protein</option>
       <option value="PEPTIDE">Peptide</option>
     </param>
     <conditional name="quant">
       <param name="use" type="boolean" label="Include quantation results" truevalue="true" falsevalue="false" />
       <when value="true">
-        <param name="type" type="select" label="Denominator">
+        <param name="dtype" type="select" label="Denominator">
           <option value="IT113">113</option>
           <option value="IT114" selected="true">114</option>
           <option value="IT115">115</option>
@@ -32,10 +32,11 @@
           <option value="Medium">Medium</option>
         </param>
       </when>
+      <when value="false"/>
     </conditional>
   </inputs>
   <outputs>
-    <data format="tabular" name="output" label="${type} report for ${on_string}"/>
+    <data format="tabular" name="output" label="${ptype} report for ${on_string}"/>
   </outputs>
   <help>
   </help>