Mercurial > repos > galaxyp > qupath_roi_splitter

comparison qupath_roi_splitter.xml @ 4:9f136ebf73ac draft

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planemo upload for repository hhttps://github.com/npinter/ROIsplitter commit 918ae25f84e7042ed36461219ff068633c1c2427
author galaxyp
date Fri, 19 Jul 2024 14:33:40 +0000
parents 24ccdcfbabac
children 17c54a716a5b
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3:24ccdcfbabac 4:9f136ebf73ac
1 <tool id="qupath_roi_splitter" name="QuPath ROI Splitter" version="@VERSION@+galaxy@VERSION_SUFFIX@"> 1 <tool id="qupath_roi_splitter" name="QuPath ROI Splitter" version="@VERSION@+galaxy@VERSION_SUFFIX@">
2 <description>Split ROI coordinates of QuPath TMA annotation by cell type (classification)</description> 2 <description>Split ROI coordinates of QuPath TMA annotation by cell type (classification)</description>
3 <macros> 3 <macros>
4 <token name="@VERSION@">0.2.1</token> 4 <token name="@VERSION@">0.3.0</token>
5 <token name="@VERSION_SUFFIX@">0</token> 5 <token name="@VERSION_SUFFIX@">0</token>
6 </macros> 6 </macros>
7 <requirements> 7 <requirements>
8 <requirement type="package" version="3.0.1">geojson</requirement> 8 <requirement type="package" version="3.0.1">geojson</requirement>
9 <requirement type="package" version="1.24.2">numpy</requirement> 9 <requirement type="package" version="1.24.2">numpy</requirement>
54 <output_collection name="output_txts" type="list" count="4"> 54 <output_collection name="output_txts" type="list" count="4">
55 <element name="F-5_Stroma.txt"> 55 <element name="F-5_Stroma.txt">
56 <assert_contents> 56 <assert_contents>
57 <has_text text="x"/> 57 <has_text text="x"/>
58 <has_text text="y"/> 58 <has_text text="y"/>
59 <has_text text="15561"/> 59 <has_text text="21153"/>
60 <has_text text="21160"/> 60 <has_text text="15570"/>
61 </assert_contents> 61 </assert_contents>
62 </element> 62 </element>
63 </output_collection> 63 </output_collection>
64 <output_collection name="output_imgs" type="list" count="4"> 64 <output_collection name="output_imgs" type="list" count="4">
65 <element name="E-5_Tumor.png"> 65 <element name="E-5_Tumor.png">
66 <assert_contents> 66 <assert_contents>
67 <has_size value="1309478"/> 67 <has_size value="459919"/>
68 </assert_contents> 68 </assert_contents>
69 </element> 69 </element>
70 </output_collection> 70 </output_collection>
71 </test> 71 </test>
72 </tests> 72 </tests>