Mercurial > repos > galaxyp > searchgui
comparison tool_dependencies.xml @ 3:379da3c75204 draft
Uploaded
author | galaxyp |
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date | Tue, 25 Jun 2013 12:35:22 -0400 |
parents | 96d4c130655f |
children | ed6c825d5fa4 |
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2:96d4c130655f | 3:379da3c75204 |
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2 <tool_dependency> | 2 <tool_dependency> |
3 <package name="SearchGUI" version="1.13.1"> | 3 <package name="SearchGUI" version="1.13.1"> |
4 <install version="1.0"> | 4 <install version="1.0"> |
5 <actions> | 5 <actions> |
6 <action type="download_by_url">http://searchgui.googlecode.com/files/SearchGUI-1.13.1_mac_and_linux.zip</action> | 6 <action type="download_by_url">http://searchgui.googlecode.com/files/SearchGUI-1.13.1_mac_and_linux.zip</action> |
7 <action type="shell_command">ls</action> | |
7 <action type="shell_command">tar -xf 'SearchGUI-1.13.1_mac_and_linux.tar'</action> | 8 <action type="shell_command">tar -xf 'SearchGUI-1.13.1_mac_and_linux.tar'</action> |
8 <action type="shell_command">cd 'SearchGUI-1.13.1_mac_and_linux'</action> | 9 <action type="shell_command">cd 'SearchGUI-1.13.1_mac_and_linux'&& chmod -R o+w 'resources' </action> |
9 <action type="shell_command">chmod -R o+w 'resources'</action> | |
10 <action type="move_directory_files"> | 10 <action type="move_directory_files"> |
11 <source_directory>.</source_directory> | 11 <source_directory>.</source_directory> |
12 <destination_directory>$INSTALL_DIR/</destination_directory> | 12 <destination_directory>$INSTALL_DIR/</destination_directory> |
13 </action> | 13 </action> |
14 <action type="shell_command">mkdir -p $BIN_DIR</action> | |
15 <action type="set_environment"> | 14 <action type="set_environment"> |
16 <environment_variable name="PATH" action="prepend_to">$BIN_DIR</environment_variable> | 15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> |
17 </action> | 16 </action> |
18 </actions> | 17 </actions> |
19 </install> | 18 </install> |
20 <readme> | 19 <readme> |
21 This package downloads and installs the SearchGUI scripts develped as part of the Peptideshaker tool. | 20 This package downloads and installs the SearchGUI scripts develped as part of the Peptideshaker tool. |