Mercurial > repos > galaxyp > thermo_raw_file_converter

diff test-data/really_small.indexed_mzML @ 10:b9b385097f13 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawFileParser commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
author galaxyp
date Sat, 10 Apr 2021 15:56:48 +0000
parents 92ac8e086317
children 19e45916daf9
line wrap: on
line diff
--- a/test-data/really_small.indexed_mzML	Wed Feb 17 09:50:26 2021 +0000
+++ b/test-data/really_small.indexed_mzML	Sat Apr 10 15:56:48 2021 +0000
@@ -1,8 +1,8 @@
-<?xml version="1.0" encoding="utf-8"?>
+<?xml version="1.0" encoding="utf-8"?>
 <indexedmzML xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" xmlns="http://psi.hupo.org/ms/mzml">
   <mzML xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" version="1.1.0" id="really_small">
     <cvList count="2">
-      <cv id="MS" fullName="Mass spectrometry ontology" version="4.1.41" URI="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo" />
+      <cv id="MS" fullName="Mass spectrometry ontology" version="4.1.48" URI="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo" />
       <cv id="UO" fullName="Unit Ontology" version="09:04:2014" URI="https://raw.githubusercontent.com/bio-ontology-research-group/unit-ontology/master/unit.obo" />
     </cvList>
     <fileDescription>
@@ -26,8 +26,8 @@
       </referenceableParamGroup>
     </referenceableParamGroupList>
     <softwareList count="1">
-      <software id="ThermoRawFileParser" version="1.3.2">
-        <cvParam cvRef="MS" accession="MS:1000799" value="ThermoRawFileParser" name="custom unreleased software tool" />
+      <software id="ThermoRawFileParser" version="1.3.3">
+        <cvParam cvRef="MS" accession="MS:1003145" name="ThermoRawFileParser" />
       </software>
     </softwareList>
     <instrumentConfigurationList count="1">
@@ -2695,78 +2695,78 @@
   </mzML>
   <indexList count="2">
     <index name="spectrum">
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     </index>
     <index name="chromatogram">
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+      <offset idRef="BasePeak_0">385537</offset>
     </index>
   </indexList>
-  <indexListOffset>388584</indexListOffset>
-  <fileChecksum>8a5e1e41cfbb53217242d8cac4a2934375c76ca9</fileChecksum>
+  <indexListOffset>388541</indexListOffset>
+  <fileChecksum>d17fa5e67c8f89705eec985e7029ba040ec4ff8c</fileChecksum>
 </indexedmzML>
\ No newline at end of file