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author galaxyp
date Thu, 09 May 2013 17:09:43 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="tint_proteomics_scripts" version="1.19.19">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">http://artifactory.msi.umn.edu/ext-release-local/msi/umn/edu/tint-proteomics-scripts/1.19.19/tint-proteomics-scripts-1.19.19.zip</action>
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7 <action type="move_directory_files">
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8 <source_directory>.</source_directory>
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9 <destination_directory>$INSTALL_DIR/</destination_directory>
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10 </action>
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11 <action type="shell_command">chmod +x $INSTALL_DIR/*cli $INSTALL_DIR/MgfFormatter</action>
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12 <action type="set_environment">
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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14 </action>
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15 </actions>
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16 </install>
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17 <readme>
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18 This package downloads and installs the proteomics scripts
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19 developed as part of the TINT framework
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20 (https://github.com/jmchilton/TINT).
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21
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22 These include iQuant and the MGF formatter.
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23 </readme>
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24 </package>
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25 </tool_dependency>