Mercurial > repos > galaxyp > unipept
diff unipept.py @ 6:9aaa46d45472 draft
"planemo upload for repository http://unipept.ugent.be/apidocs commit 228074586987e33782b8c2faf61257ac7506e51e"
| author | galaxyp |
|---|---|
| date | Tue, 02 Jun 2020 10:30:01 -0400 |
| parents | 917fd3ebc223 |
| children | 75b3b3d0adbf |
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--- a/unipept.py Thu Apr 30 07:39:28 2020 -0400 +++ b/unipept.py Tue Jun 02 10:30:01 2020 -0400 @@ -337,7 +337,7 @@ ec_numbers.append(ec['ec_number']) protein_counts.append(str(ec['protein_count'])) if extra: - ec_names.append(ec['name'] if 'name' in ec else '') + ec_names.append(ec['name'] if 'name' in ec and ec['name'] else '') vals = [','.join(ec_numbers), ','.join(protein_counts)] if extra: vals.append(','.join(ec_names)) @@ -360,7 +360,7 @@ go_terms.append(go['go_term']) protein_counts.append(str(go['protein_count'])) if extra: - go_names.append(go['name'] if 'name' in go else '') + go_names.append(go['name'] if 'name' in go and go['name'] else '') else: for go_type in go_types: if go_type in go: @@ -368,7 +368,7 @@ go_terms.append(_go['go_term']) protein_counts.append(str(_go['protein_count'])) if extra: - go_names.append(_go['name'] if 'name' in _go else '') + go_names.append(_go['name'] if 'name' in _go and _go['name'] else '') vals = [','.join(go_terms), ','.join(protein_counts)] if extra: vals.append(','.join(go_names))