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1 <tool id="pepxml_to_xls" name="Convert PepXML to Tabular" version="0.1.0">
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2 <description></description>
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3
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4 <requirements>
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5 <requirement type="package">transproteomic_pipeline</requirement>
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6 </requirements>
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7
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8
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9 <command interpreter="python">
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10 pepxml_viewer_wrapper.py --input=${input} --export_spreadsheet
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11 </command>
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12
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13 <inputs>
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14 <param format="pepxml" name="input" type="data" label="Pep XML Input"/>
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15 </inputs>
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16
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17 <outputs>
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18 <data format="pepxml.tsv" name="output" from_work_dir="input.pep.xls" />
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19 </outputs>
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20
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21 <help>
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22
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23 </help>
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24 </tool>
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