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1 <tool id="protxml_to_xls" name="Convert ProtXML to Tabular" version="0.1.0">
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2 <description></description>
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3
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4 <command interpreter="python">
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5 protxml2html_wrapper.py --input=${input} --export_spreadsheet
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6 </command>
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7
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8 <inputs>
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9 <param format="prot.xml" name="input" type="data" label="Prot XML Input"/>
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10 </inputs>
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11
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12 <outputs>
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13 <data format="protxml.tsv" name="output" from_work_dir="input.prot.xls" />
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14 </outputs>
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15
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16 <requirements>
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17 <requirement type="package">transproteomic_pipeline</requirement>
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18 </requirements>
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19
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20 <help>
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21 </help>
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22 </tool>
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