Mercurial > repos > ganjoo > webservice_toolsuite

annotate WebServiceToolWorkflow/WADLRESTclient2.py~ @ 0:d5cd409b8a18 default tip

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Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author ganjoo
date Tue, 07 Jun 2011 18:00:50 -0400
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d5cd409b8a18 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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1 import warnings
d5cd409b8a18 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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2 import platform
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3
d5cd409b8a18 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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4 with warnings.catch_warnings():
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5 warnings.simplefilter("ignore")
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6 from jpype._jpackage import JPackage
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7 from jpype import *
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8 import os.path
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9 import sys
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10
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11
d5cd409b8a18 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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12
d5cd409b8a18 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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13 javahome = os.environ.get('JAVA_HOME')
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14 galaxyhome=os.environ.get('GALAXY_HOME')
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15 classpath= galaxyhome + '/tools/restclientWADL/ParserForWADL/bin'
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16 jarpath = galaxyhome + '/tools/restclientWADL/WADLParser/dist/lib/'
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17 machine = platform.machine()
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18
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19 if machine == 'x86_64' :
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20 print 'a'
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21 startJVM("%s/jre/lib/amd64/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
d5cd409b8a18 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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22 elif machine == 'i686' :
d5cd409b8a18 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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23 print 'b'
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24 startJVM("%s/jre/lib/i386/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
d5cd409b8a18 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
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25 elif machine == 'sun4u' :
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26 startJVM("%s/jre/lib/sparc/server/libjvm.so" % javahome,"-ea", "-Djava.class.path=%s" % classpath,"-Djava.ext.dirs=%s" % jarpath)
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27 else :
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28 print 'c'
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29 System.exit("Could not identify machine, please specify path to libjvm.so")
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32
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33 pkg=JPackage('lsdis')
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34 urlToPass=java.net.URL(sys.argv[2])
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35 wadlUrl = sys.argv[2]
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36
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37 outputfileParamNames=open(sys.argv[5],'w')
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38 outputfileParamNames.seek(0,0)
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39 # outputfileParamTypes=open(sys.argv[6],'w')
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40 # outputfileParamTypes.seek(0,0)
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41
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42 webserviceId = sys.argv[3]
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43 resUrl = sys.argv[4]
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44
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45 urls = []
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46 methods = []
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47
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48 WADLParserDriver=pkg.WADLParserDriver
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49 wPD=WADLParserDriver()
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50 wPD.parse(urlToPass)
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51 urls = wPD.getUrl()
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52 methods = wPD.getCompleteMethodList()
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53
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54 i=0
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55 for method in methods:
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56 x = str(method.getId())
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57 y = str(urls.get(0))
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58 if x == webserviceId :
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59 if y == resUrl :
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60 for param in method.getRequest().getParams():
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61 if param.isRequired():
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62 val = 'true'
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63 else :
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64 val = 'false'
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65 outputfileParamNames.write(str(param.getName())+"\t" + str(param.getType())+"\t" + str(param.getDefault1()) + "\t" + val +"\t"+resUrl+"\n")
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66 # outputfileParamTypes.write(str(param.getType())+"\n")
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67 break
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68 i=i+1