Mercurial > repos > ganjoo > webservice_toolsuite

comparison WebServiceToolWorkflow/lib/SAWADLParser/euPathWADL/GenesByMolecularWeight.sawadl~ @ 0:d5cd409b8a18 default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author ganjoo
date Tue, 07 Jun 2011 18:00:50 -0400
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:d5cd409b8a18
1 <?xml version="1.0"?>
2 <application targetNamespace="http://wadl.dev.java.net/2009/02"
3 xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
4 xsi:schemaLocation="http://wadl.dev.java.net/2009/02 wadl.xsd"
5 xmlns:sawadl="http://www.w3.org/2002/ws/sawadl/spec/sawadl#"
6 xmlns:euPathOntology="http://www.owl-ontologies.com/sws_euPathOntology.owl"
7 xmlns="http://wadl.dev.java.net/2009/02" >
8 <resources base="http://eupathdb.org/webservices/GeneQuestions/">
9 <resource path="GenesByMolecularWeight.xml" sawadl:modelReference="euPathOntology#GeneQuestions">
10 <method name="POST" id="genesbymolecularweight" sawadl:modelReference="euPathOntology#Genesbymolecularweight">
11 <doc title="display_name">Molecular Weight</doc>
12 <doc title="summary">
13 Find genes whose unmodified protein product has a molecular weight in a range that you specify.
14 </doc>
15 <doc title="description">
16 Find genes whose unmodified protein product has a molecular weight in a range that you specify.
17 Molecular weights are machine calculated from the raw translation and does not take into account any protein or residue modifications. For translations containing ambiguous amino acid codes (B, Z, X) we calculate the average of the upper and lower bound of the molecular weight.
18 </doc>
19
20 <request>
21 <param name="organism" style="query" type="xsd:string" required="true" sawadl:modelReference="euPathOntology#Organism">
22 <doc title="prompt">Organism</doc>
23 <doc title="help">Organism</doc>
24 <doc title="default">
25 Entamoeba dispar,Entamoeba histolytica,Entamoeba invadens,Cryptosporidium parvum,Cryptosporidium hominis,Cryptosporidium muris,Giardia Assemblage A isolate WB,Giardia Assemblage B isolate GS,Giardia Assemblage E isolate P15,Encephalitozoon cuniculi,Encephalitozoon intestinalis,Plasmodium falciparum,Plasmodium vivax,Plasmodium yoelii,Plasmodium berghei,Plasmodium chabaudi,Plasmodium knowlesi,Toxoplasma gondii,Neospora caninum,Trichomonas vaginalis,Trypanosoma cruzi,Leishmania braziliensis,Leishmania infantum,Leishmania major,Leishmania mexicana,Trypanosoma brucei,Trypanosoma congolense,Trypanosoma vivax
26 p </doc>
27 <doc title="MultiValued">
28 Provide one or more values. Use comma as a delimter.
29 </doc>
30 <option value="Entamoeba dispar">
31 <doc title="description">Entamoeba dispar</doc>
32 </option>
33
34 <option value="Entamoeba histolytica">
35 <doc title="description">Entamoeba histolytica</doc>
36 </option>
37
38 <option value="Entamoeba invadens">
39 <doc title="description">Entamoeba invadens</doc>
40 </option>
41
42 <option value="Cryptosporidium parvum">
43 <doc title="description">Cryptosporidium parvum</doc>
44 </option>
45
46 <option value="Cryptosporidium hominis">
47 <doc title="description">Cryptosporidium hominis</doc>
48 </option>
49
50 <option value="Cryptosporidium muris">
51 <doc title="description">Cryptosporidium muris</doc>
52 </option>
53
54 <option value="Giardia Assemblage A isolate WB">
55 <doc title="description">Giardia Assemblage A isolate WB</doc>
56 </option>
57
58 <option value="Giardia Assemblage B isolate GS">
59 <doc title="description">Giardia Assemblage B isolate GS</doc>
60 </option>
61
62 <option value="Giardia Assemblage E isolate P15">
63 <doc title="description">Giardia Assemblage E isolate P15</doc>
64 </option>
65
66 <option value="Encephalitozoon cuniculi">
67 <doc title="description">Encephalitozoon cuniculi</doc>
68 </option>
69
70 <option value="Encephalitozoon intestinalis">
71 <doc title="description">Encephalitozoon intestinalis</doc>
72 </option>
73
74 <option value="Plasmodium falciparum">
75 <doc title="description">Plasmodium falciparum</doc>
76 </option>
77
78 <option value="Plasmodium vivax">
79 <doc title="description">Plasmodium vivax</doc>
80 </option>
81
82 <option value="Plasmodium yoelii">
83 <doc title="description">Plasmodium yoelii</doc>
84 </option>
85
86 <option value="Plasmodium berghei">
87 <doc title="description">Plasmodium berghei</doc>
88 </option>
89
90 <option value="Plasmodium chabaudi">
91 <doc title="description">Plasmodium chabaudi</doc>
92 </option>
93
94 <option value="Plasmodium knowlesi">
95 <doc title="description">Plasmodium knowlesi</doc>
96 </option>
97
98 <option value="Toxoplasma gondii">
99 <doc title="description">Toxoplasma gondii</doc>
100 </option>
101
102 <option value="Neospora caninum">
103 <doc title="description">Neospora caninum</doc>
104 </option>
105
106 <option value="Trichomonas vaginalis">
107 <doc title="description">Trichomonas vaginalis</doc>
108 </option>
109
110 <option value="Trypanosoma cruzi">
111 <doc title="description">Trypanosoma cruzi</doc>
112 </option>
113
114 <option value="Leishmania braziliensis">
115 <doc title="description">Leishmania braziliensis</doc>
116 </option>
117
118 <option value="Leishmania infantum">
119 <doc title="description">Leishmania infantum</doc>
120 </option>
121
122 <option value="Leishmania major">
123 <doc title="description">Leishmania major</doc>
124 </option>
125
126 <option value="Leishmania mexicana">
127 <doc title="description">Leishmania mexicana</doc>
128 </option>
129
130 <option value="Trypanosoma brucei">
131 <doc title="description">Trypanosoma brucei</doc>
132 </option>
133
134 <option value="Trypanosoma congolense">
135 <doc title="description">Trypanosoma congolense</doc>
136 </option>
137
138 <option value="Trypanosoma vivax">
139 <doc title="description">Trypanosoma vivax</doc>
140 </option>
141 </param>
142
143 <param name="min_molecular_weight" style="query" type="xsd:string" required="true" sawadl:modelReference="euPathOntology#MolecularWeight">
144 <doc title="prompt">Min Molecular Weight (Daltons)</doc>
145 <doc title="help">Lower bound for the protein molecular weight</doc>
146 <doc title="default">10000</doc>
147 </param>
148
149 <param name="max_molecular_weight" style="query" type="xsd:string" required="true" sawadl:modelReference="euPathOntology#MolecularWeight">
150 <doc title="prompt">Max Molecular Weight (Daltons)</doc>
151 <doc title="help">Upper bound for the protein molecular weight</doc>
152 <doc title="default">50000</doc>
153 </param>
154 <param name="o-fields" style="query" type="xsd:string" required="false" default="none" sawadl:modelReference="euPathOntology#MolecularWeight">
155 </param>
156 <param name="o-tables" style="query" type="xsd:string" required="false" default="none">
157 </param>
158
159
160 </request>
161
162 <response>
163 <representation mediaType="text/xml" sawadl:modelReference="euPathOntology#ListOfGenes"/>
164 <representation mediaType="text/plain" sawadl:modelReference="euPathOntology#ListOfGenes"/>
165 </response>
166 </method>
167 </resource>
168 </resources>
169 </application>