Mercurial > repos > ganjoo > webservice_toolsuite

comparison WebServiceToolWorkflow/DeleteTool1.py~ @ 0:d5cd409b8a18 default tip

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Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author ganjoo
date Tue, 07 Jun 2011 18:00:50 -0400
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-1:000000000000 0:d5cd409b8a18
1 import os
2
3 galaxyhome=os.environ.get('GALAXY_HOME')
4
5 f1=open(galaxyhome+'/tool_conf.xml','r')
6 f1.seek(0,0)
7
8 f3=open(galaxyhome+'/tools/WebServiceToolWorkflow/DeleteTool2.xml','w')
9 f3.seek(0,0)
10
11 f3.write('<tool id="DeleteTool3" name="Step 2">\n')
12 f3.write(' <description> :Choose Web Service Tool to be deleted </description>\n')
13
14 f3.write(' <command interpreter="python">\n DeleteTool2.py \n'+' $output \n $tool \n </command>\n')
15 f3.write(' <inputs>\n <param name ="tool" type ="select" label =" Select the Web service tool you want to delete, by its order number (position in the Web Service Tools section on the left) " help="see tip below">\n')
16
17
18 ##first copy everything upto WebServiceTool1.xml into another file f2
19 line = f1.readline()
20 lineStripped=line.lstrip()
21
22 while not lineStripped == '<section name="Web Service Tools" id="WebServices">\n':
23 line = f1.readline()
24 lineStripped = line.lstrip()
25 else:
26 print line
27
28 i=0
29 while not lineStripped == '</section>\n':
30 i=i+1
31 line = f1.readline()
32 lineStripped = line.lstrip()
33 else:
34 print line
35
36 j=0
37 while not j==i-1:
38 j=j+1
39 f3.write(' <option value = "client_'+ str(j) + '.xml"> Web Service Tools: Tool '+ str(j) + '</option>\n')
40 else:
41 print i
42
43 f3.write(' </param>\n </inputs>\n')
44 f3.write(' <outputs>\n <data format="tabular" name="output" />\n </outputs>\n')
45 f3.write(' <help>\n </help>\n</tool>')
46