diff WebServiceToolWorkflow/WebServiceTool_input_method.xml @ 0:d5cd409b8a18 default tip

Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author ganjoo
date Tue, 07 Jun 2011 18:00:50 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/WebServiceToolWorkflow/WebServiceTool_input_method.xml	Tue Jun 07 18:00:50 2011 -0400
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+<tool id="WebServiceTool_input_method" name="Step 2: Verify Settings" version="1.0.0">
+  <description>  This tool lets the user choose a method and a resource from the Web service description document. Many methods/operations could be grouped together in one description document. But each method/operation requires a unique tool to invoke it. So each method has to be registered with Galaxy individually.</description>
+  <command interpreter="python">
+	WebServiceTool_input_method.py
+	$url
+	$wadl
+	$webservice
+	$resourceUrl
+	$output
+</command>
+  <inputs>
+<param name = "url" type="data" label="a. The previous step was" help="For your information only. The previous step that was executed is displayed. No action required."/>
+<param name ="wadl" type ="select" data_ref="url" label ="b. The tool chosen was" help="Displays the Web service tool chosen in Step 1. No action required.">
+  <options from_dataset="url">
+    <column name="name" index ="0"/>
+    <column name="value" index ="0"/>
+    <filter type="unique_value" name="unique" column="0"/>
+  </options>
+</param>
+<param name ="webservice" display = "radio" type ="select" data_ref="url" label ="c. Select the function of the tool you would like to use" help="Some tools have more than one function. It is important to select the appropriate function. One or more functions may be displayed here.">
+  <options from_dataset="url">
+    <column name="name" index ="1"/>
+    <column name="value" index ="1"/>
+    <filter type="unique_value" name="unique1" column="1"/>
+  </options>
+</param>
+<param name ="resourceUrl" display = "radio" type ="select" data_ref="url" label ="d. Further refine the tool function. Select an option based on the documentation or experience" help="Different tools have different options to refine the tool. This could be a choice of formats or resources you want to search. Make selection based on tool documentation or experience.">
+  <options from_dataset="url">
+    <column name="name" index ="2"/>
+    <column name="value" index ="2"/>
+    <filter type="param_value" ref="webservice" name="resourceUri" column="1"/>
+    <filter type="unique_value" name="unique2" column="2"/>
+  </options>
+</param>
+  </inputs>
+  <outputs>
+    <data format="tabular" name="output" />
+  </outputs>
+
+  <help>
+  
+
+.. class:: infomark
+ 
+**TIP:** a. For your information only. The previous step that was executed is displayed. No action required.
+
+.. class:: infomark
+ 
+**TIP:** b. Displays the Web service tool chosen in Step 1. No action required
+
+.. class:: infomark
+ 
+**TIP:** c. Some tools have more than one function. It is important to select the appropriate function.
+            One or more functions may be displayed here.
+            
+.. class:: infomark            
+
+**TIP:** d. Different tools have different options to refine the tool. This could be a choice of formats 
+            or resources you want to search. 
+            Make selection based on tool documentation or experience.
+
+
+*NOTE: Step 1, Step 2 and Step 3 merely add this tool to Galaxy. To use the tool, after completing Step 3, go to the Tools section on left
+and find the tool under Web Service Tools and Web Service Workflow Tools.*
+
+  </help>
+
+</tool>
+