Mercurial > repos > ganjoo > webservice_toolsuite
diff WebServiceToolWorkflow/WebServiceTool_input_method.xml @ 0:d5cd409b8a18 default tip
Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author | ganjoo |
---|---|
date | Tue, 07 Jun 2011 18:00:50 -0400 |
parents | |
children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/WebServiceToolWorkflow/WebServiceTool_input_method.xml Tue Jun 07 18:00:50 2011 -0400 @@ -0,0 +1,69 @@ +<tool id="WebServiceTool_input_method" name="Step 2: Verify Settings" version="1.0.0"> + <description> This tool lets the user choose a method and a resource from the Web service description document. Many methods/operations could be grouped together in one description document. But each method/operation requires a unique tool to invoke it. So each method has to be registered with Galaxy individually.</description> + <command interpreter="python"> + WebServiceTool_input_method.py + $url + $wadl + $webservice + $resourceUrl + $output +</command> + <inputs> +<param name = "url" type="data" label="a. The previous step was" help="For your information only. The previous step that was executed is displayed. No action required."/> +<param name ="wadl" type ="select" data_ref="url" label ="b. The tool chosen was" help="Displays the Web service tool chosen in Step 1. No action required."> + <options from_dataset="url"> + <column name="name" index ="0"/> + <column name="value" index ="0"/> + <filter type="unique_value" name="unique" column="0"/> + </options> +</param> +<param name ="webservice" display = "radio" type ="select" data_ref="url" label ="c. Select the function of the tool you would like to use" help="Some tools have more than one function. It is important to select the appropriate function. One or more functions may be displayed here."> + <options from_dataset="url"> + <column name="name" index ="1"/> + <column name="value" index ="1"/> + <filter type="unique_value" name="unique1" column="1"/> + </options> +</param> +<param name ="resourceUrl" display = "radio" type ="select" data_ref="url" label ="d. Further refine the tool function. Select an option based on the documentation or experience" help="Different tools have different options to refine the tool. This could be a choice of formats or resources you want to search. Make selection based on tool documentation or experience."> + <options from_dataset="url"> + <column name="name" index ="2"/> + <column name="value" index ="2"/> + <filter type="param_value" ref="webservice" name="resourceUri" column="1"/> + <filter type="unique_value" name="unique2" column="2"/> + </options> +</param> + </inputs> + <outputs> + <data format="tabular" name="output" /> + </outputs> + + <help> + + +.. class:: infomark + +**TIP:** a. For your information only. The previous step that was executed is displayed. No action required. + +.. class:: infomark + +**TIP:** b. Displays the Web service tool chosen in Step 1. No action required + +.. class:: infomark + +**TIP:** c. Some tools have more than one function. It is important to select the appropriate function. + One or more functions may be displayed here. + +.. class:: infomark + +**TIP:** d. Different tools have different options to refine the tool. This could be a choice of formats + or resources you want to search. + Make selection based on tool documentation or experience. + + +*NOTE: Step 1, Step 2 and Step 3 merely add this tool to Galaxy. To use the tool, after completing Step 3, go to the Tools section on left +and find the tool under Web Service Tools and Web Service Workflow Tools.* + + </help> + +</tool> +