annotate test-data/file_1_sequence.txt @ 1:89f63d298b43 draft

use _JAVA_OPTIONS to set default memory limit
author gbcs-embl-heidelberg
date Thu, 26 Nov 2015 09:00:03 -0500
parents 424f44e2124e
children
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1 @D3FCO8P1:229:C49NHACXX:8:1101:1347:2097 1:N:0:
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2 CACTGTTCAATGCCAATAGCAATGAAACCACCCATANAANNNNNACGGCTGAACANNNNNNNACNNGATATAGCATAAATGNANNNTNNNNANTNNNNNN
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3 +
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4 CCCFFFFFHHHHHJJJJJJJJJJJIJJJIJJJJJJI#1?#####00?FHIJJJJI#######--##,,=A=CDDDDDDDEE###################
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5 @D3FCO8P1:229:C49NHACXX:8:1101:1406:2140 1:N:0:
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6 CACTGTAATTTATCTCTTTTCATATAACTCTCTGGTAATNNNNAACATAAAACCGANCGCACATGATAATTCTTCCAAATTTATATATNAATTTTATANN
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7 +
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8 BBCFFFDFHHHGHHIJJJJJJIJIJIGHHHIJJJJGGIJ####11?DHHIIIIGHI#-<FEHGIJIJHGHFHHHHHFFFFFFEFEEEE#,;?BDDFDE##
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9 @D3FCO8P1:229:C49NHACXX:8:1101:1418:2170 1:N:0:
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10 CACTGTTGTAAAGTAGCTAATCAACTAAAAATTTTAATTCCAGTAGGAACTGCAATNATTATAGTAGCTGAGGTAAAATAAGCTCGAGTATCTACATCTA
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11 +
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12 CCCFFFFFHHHHHIJJJJJJJJJJJJIJJJJJJJJJJJJIJJJIIJJJJJJJJJJI#0?FHIJJJJJJJJGIJHIIJJJHHHHHHFFD@CEEEFDDDDDC
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13 @D3FCO8P1:229:C49NHACXX:8:1101:1385:2179 1:N:0:
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14 CACTGTACCAGACTTGTGGGGCGACTGTTCAGGCCGTGTAGGGCATTCAGGGGTAGCATGGGAGCAGCTAGATTAGATGCAGATCTCTGAGAAGCTGTCT
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15 +
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16 =?@D;DBDDBFDFIIEF??8@EFGFHFGAFFGGIHH;5.=CEE),7.;(;ACB9>?CAAC??9?B@9??C:(:@A::@CC:4+:>@C@AAC(>9?CCCC@
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17 @D3FCO8P1:229:C49NHACXX:8:1101:1452:2184 1:N:0:
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18 CACTGTGTGGGAAAGGGAAGGGCAAGGGGGAGGGGAAGAATTTAACCGGGCGGGAGGAGAATCGGGCAGGGAAGAATGGTTGGTTGGTGGAACAACTGAA
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19 +
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20 BB=DDDEDHHHDHJJGIGIJCBDHEHGJJJBGEHIBGGHFGFFGGHFFDD>?BDBBDDDDDD@ADD;>@D98AB?CCDD:CBB<ADD8<?<@?B?ACDCA
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21 @D3FCO8P1:229:C49NHACXX:8:1101:1370:2193 1:N:0:
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22 CACTGTGCGAGTGTTTGCACGATTATCTCATATTCAAACTGGTCAACATGGGCATACGATTTCTTGCGCTCCTTGCTTTCAAACAGCCTGTCTCTTATAC
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23 +
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24 CCCFFFF+CFHFHIIJJJJJJIJJIJJJJJJJJJJIJJJJJJBGIJJJJJJJJJJJJJJJJIJJJJHHFFFDEEEDDDDDDDDDDDBBDDDDDDDDDDDD
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25 @D3FCO8P1:229:C49NHACXX:8:1101:1486:2204 1:N:0:
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26 ATTCCGCATCTGTTGCTCATATAGGAATTGTTCTATCAGGACTTTTAACTATAACTTATTGAGGTTTATGTGGTTCTTATACATTAATAATTGCTCATGG
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27 +
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28 @BCFFFDFHHHGHJJIJJJJJJJJJJJJJJJJJJIJJJJJJJIJJJIJJJJJJIJJJJJJIJJJHIJJJJHIIHHHHIJJJIJJHHHHHHFFFFEFCEEE
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29 @D3FCO8P1:229:C49NHACXX:8:1101:1460:2207 1:N:0:
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30 ATTCCGGTCGTTGTGATACTAAACTTTCTCAAATAATAAAAAAAAAGAATAAAATTCCTAATAATGAAATAGTTGATCCAATAGTTGATACAATATTTCA
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31 +
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32 @BCFFFFFHHHGHIIGIJJIIJJJJJJIIHIIJHGIHGJIJIJJJHGCCHIGGEHH>EEFFFFFFFACCEACEDCDCCCCCDCDEEDDDE(:ACCD:@D@
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33 @D3FCO8P1:229:C49NHACXX:8:1101:1339:2211 1:N:0:
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34 ATTCCGAGTAAATTAAATGCGAAAATAAAAGGCAGCATGAGNTANTTACTNAAANGGGGTCATNAACAGTACTTGTGCTCCNCCANGTCGNCGNTNCNCT
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35 +
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36 @@CFFFFFFHHHHJJJIJJJJJJJIJIJJJJJJJJJJJJJJ#0?#0?DHI#-;F#-;DH?EFH#,;BCDEEEEEDDCCCDD#,8?#,5?B##########
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37 @D3FCO8P1:229:C49NHACXX:8:1101:1402:2222 1:N:0:
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38 ATTCCGATAGTAATAATATTACCTAATACAAATAATGAAATATCATATTGATGAAATCATTTTACTATACCTGATACAGTTGTTATAGCTCCGATAGCTC
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39 +
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40 CCCFFFFDFHHHHJJIIJJJGJIIJJIIJHIJIJIJIIJJJJJJJIIJJIGGHIJJJIJGJJIIIHIIHJ>GHIIIIIIGGGIIJJJJIH)=ABDDDDEE
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41 @D3FCO8P1:229:C49NHACXX:8:1101:1388:2233 1:N:0:
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42 ATTCCGAATTTAATGCAATTACCAATCTTACAAGTTATTATACCAATAATTGCATCTATGTTTTGCTTTCTTGACAAGAAACACAAGGTAACTTGGGTTA
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43 +
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44 1?8ADDDD<DFDFB<?:EIBHHIIFF:AHI?HC<*:1:EF@G49D<B3?@F4?BDD*BG*?B??B<B8888@F)).@;@;@;=6?###############
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45 @D3FCO8P1:229:C49NHACXX:8:1101:1497:2240 1:N:0:
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46 ATTCCGGGCATCGTTGCTGCTCTTAACGTCCAAATGGACGGGCGACTCCCCGAACATTGCCTCGAGTCGTGTCTCCACGGATTTCTGGACGTCCGAATCG
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47 +
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48 CCCFFFFFHHHHHJJJIIIJIHGIJJIHHJJJHIJJJFHIJJBHGGHHHHFEDDDDDDDDDDDDDDCCBDDDDDDDDDDDDDDDDEDD@BDDDDBB@BBD
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49 @D3FCO8P1:229:C49NHACXX:8:1101:1399:2245 1:N:0:
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50 ATTCCGAAATATAAAGTATAAGCAGCTCTAAAAAAAGATAAAAAAGATAATAAAATTATAGAAATTCAAGATCAAGAAACAATTCTATTTAATAAAGAAA
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51 +
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52 @@CFFFFFFBDFHGIGHGJIJJJJJIIDHHIJJIGGHEEGGIIIIGGDHIGE@FHHIIJJFGGHGHCAHH@D;CD;CCCECDDCCDDDCD3>ACAA:@?C
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53 @D3FCO8P1:229:C49NHACXX:8:1101:1664:2088 1:N:0:
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54 GCTACCAAGTTTATAAATGGCAACCTTAAGTGTAANNNANNNNNTATGCACAGNANNNNNNNNANNNATGCAAAACGACTCNNNNNNNNNNNNCNNNNNN
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55 +
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56 CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJIIHIJ###1#####20?FHJJJJ#.########-###--;BDFEEECDDDD###################
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57 @D3FCO8P1:229:C49NHACXX:8:1101:1512:2095 1:N:0:
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58 GCTACCACGTTCATAAGATACATTAGCTAAACAAAANAANNNNNAAGAACATAAANNNNNNNCANNTATTAATGTATAAGANCNNNANNNNCNTNNNNNN
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59 +
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60 CC@FFFFFHHHHHJJJJJJIJJJJIJJJJIJJJJJJ#1C#####00?FIJJJJJJ#######--##,5?DDEEEFCFFEDD###################
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61 @D3FCO8P1:229:C49NHACXX:8:1101:1630:2114 1:N:0:
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62 GCTACCCGTTGGAGGAGGAGCCGCCATGAATGCCCTGCGNNNNTTCTACCTGGAGANNNCGGTGGTCACACGAGCCTACACCACGGTCNNCGTGCTNNNN
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63 +
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64 CCCFFFFFHHHHGJJGHJGHIJJJJJJJJJJJJJJJJJJ####.-;DHIJJHHHHH###,,=?BDBDDDDDDDDDDDDDDDDDDDDDD##+28@DD####
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65 @D3FCO8P1:229:C49NHACXX:8:1101:1540:2119 1:N:0:
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66 GCTACCTGGACTCAAGACCTAATTGCATTAACCGTCTGTNNNNTACGTAGCGTATGNNATTGCGCACTTCTTCTGCGGATAGTCCTTCNNCATCTCNNNN
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67 +
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68 CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJIJ####20?GHIJJJIJIJ##-5CEFHFFDDEEDDDDDDDDDDDDDEDDDD##+2?BDD####
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69 @D3FCO8P1:229:C49NHACXX:8:1101:1503:2124 1:N:0:
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70 GCTACCTACATATACTTATAGGCATACTTATACGACTTCNNNNCCCGGTTAATATGNNGTGGCCCGTATAAGTTAATGGGCACAACCGNNTGGGACNNNN
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71 +
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72 CCCFFFFFHHHHHIJJJJJJJJJJJIJJJJJJJJJJJJJ####00BFHGIIJJJJJ##--BEHJJHDFFEDEEFEEEDDDDDDDDDDD##+2<B@B####
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73 @D3FCO8P1:229:C49NHACXX:8:1101:1671:2150 1:N:0:
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74 GCTACCTCCACTCGCATGTGTATCTAATGAATGCCTCAANACGCTCCTGAACGCAANCAGGTATGTGTGGTAGACCAAAAAAAAAAAANCGGCAGGTANN
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75 +
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76 CCCFFFFFHHHHHJJJJJJJHIJJJJJJJJJJJJJJJJJ#2?FHIJJJJHIJJJJJ#.;DHCHHHHHHHFDFFEEEEDDDDDDDDDDD############
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77 @D3FCO8P1:229:C49NHACXX:8:1101:1552:2151 1:N:0:
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78 CGAAACAACTTAAGGCTGAAAATTATTTATTTGACTTGTGTCAAATATAAAAATGTNTTGTGTAGAAACGGTAATGTGAAATTAATGTNAAATATTCTNN
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79 +
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80 CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJIIIJJJJHIJJJJIJIJJJIJIJJI#0?FGIIJJJJJJIIEIJJHHHGHHHFFFFFF#,;ABDEDEE##
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81 @D3FCO8P1:229:C49NHACXX:8:1101:1700:2159 1:N:0:
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82 CGAAACTGCAATGCAAGTGGATTAGAGGATTGCAGCTGGAGGGGTAACAGCAGTGCNTTCGAAATATGTATCTTACAGCATTTCTGGGNTCCTCGTCCGN
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83 +
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84 CCCFFFFFHHHHHJJJJHIIIIJIJIJJJJJJJJJJJJJFHJJJ?FHCFFHGIGHC#-5;DHHFHHHFCDFFFFFEEEECEDCDCCDC#,8<BBDABB##
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85 @D3FCO8P1:229:C49NHACXX:8:1101:1652:2170 1:N:0:
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86 CGAAACCTCTTGGGTGTATTGGTTGGCCGTTTTACTCTTTTGTTGGAGACTGAGAANCTTAGCTGATATAACTTCTACCGATTCTCCTTTAACTGCACTT
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87 +
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88 ?@@FFDFFHFHHHI?FEEEHHIHHGIEGHHIJJHIIGIIIJFGIJJHIIIEHIIHG#-;CEHHHHDFFFFFDEEC@CECDD?@CDD@CACDCDDDDCDDD
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89 @D3FCO8P1:229:C49NHACXX:8:1101:1537:2174 1:N:0:
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90 CGAAACAAATGACCAAATCCTAGGTGTTTGAGCGCGGACTGGAGGCGATTCCGCTGTCCGTGGATCTGTGGATCCACTACCTAATGCACGTTAAGTCCAA
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91 +
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92 @@@DADDDHHAHHGGB@BHIIIFE<AHHI;4?9DHGE@A;AHGEHEE>AC@@CB@BBA@?BBBBA@CCDCCCCC<493?CCCCCC>:>A<8???AC####
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93 @D3FCO8P1:229:C49NHACXX:8:1101:1563:2176 1:N:0:
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94 CGAAACGGAAGAGAAAAAAATATAAAGTGTCAAGGGGCGTGTGCAGCGACACTTCGCCGACCCCTCCCCACATTATTTTTTTGCCGCCCGCTGGTAGCAG
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95 +
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96 ;@@BDDDA:DBFDF;A<A@EGGB@:?D1:D?9:BGIDGE4@###########################################################
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97 @D3FCO8P1:229:C49NHACXX:8:1101:1587:2187 1:N:0:
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98 CGAAACAAATAATCAAACTACATCGACAAAATGTCAATATCATGCAGCTGCTTCAAAACCAAAATGATGATTTTTTGAGAAGTGATTATTTAAATGTCGT
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99 +
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100 CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJIJJIJJJJJJJJJJJJJJJJJJJJJJJJJJIJIJJJJJJJJJJHHFFDDDEDCDDFEEDFEEEDEEFEDD