--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/markdupes_metrics.txt	Wed Nov 25 12:37:28 2015 -0500
@@ -0,0 +1,112 @@
+## htsjdk.samtools.metrics.StringHeader
+# org.embl.gbcs.je.jeduplicates.MarkDuplicatesWithMolecularCode MISMATCHES=2 MAX_NUMBER_OF_N=1 BARCODE_FILE=/var/folders/cf/k7c5rjhj1sggk6x8z1jnw4b80000gp/T/tmp2n_ITx/files/000/dataset_5.dat SLOTS=[-1, -2] INPUT=[/var/folders/cf/k7c5rjhj1sggk6x8z1jnw4b80000gp/T/tmp2n_ITx/files/000/dataset_4.dat] OUTPUT=/var/folders/cf/k7c5rjhj1sggk6x8z1jnw4b80000gp/T/tmp2n_ITx/files/000/dataset_6.dat METRICS_FILE=/var/folders/cf/k7c5rjhj1sggk6x8z1jnw4b80000gp/T/tmp2n_ITx/files/000/dataset_7.dat COMMENT=[test-run] REMOVE_DUPLICATES=true ASSUME_SORTED=true DUPLICATE_SCORING_STRATEGY=SUM_OF_BASE_QUALITIES READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).*. OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT    SPLIT_CHAR=: TRIM_HEADERS=false MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicatesWithMolecularCode COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false GA4GH_CLIENT_SECRETS=client_secrets.json
+## htsjdk.samtools.metrics.StringHeader
+# Started on: Tue Nov 10 17:01:18 CET 2015
+
+## METRICS CLASS	picard.sam.DuplicationMetrics
+LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
+Unknown Library	196	674	196	186	467	0	0.725389	216
+
+## HISTOGRAM	java.lang.Double
+BIN	VALUE
+1.0	0.997418
+2.0	1.041445
+3.0	1.043389
+4.0	1.043474
+5.0	1.043478
+6.0	1.043478
+7.0	1.043478
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+14.0	1.043478
+15.0	1.043478
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+17.0	1.043478
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+21.0	1.043478
+22.0	1.043478
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+24.0	1.043478
+25.0	1.043478
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+27.0	1.043478
+28.0	1.043478
+29.0	1.043478
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+34.0	1.043478
+35.0	1.043478
+36.0	1.043478
+37.0	1.043478
+38.0	1.043478
+39.0	1.043478
+40.0	1.043478
+41.0	1.043478
+42.0	1.043478
+43.0	1.043478
+44.0	1.043478
+45.0	1.043478
+46.0	1.043478
+47.0	1.043478
+48.0	1.043478
+49.0	1.043478
+50.0	1.043478
+51.0	1.043478
+52.0	1.043478
+53.0	1.043478
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+55.0	1.043478
+56.0	1.043478
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+58.0	1.043478
+59.0	1.043478
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+66.0	1.043478
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+69.0	1.043478
+70.0	1.043478
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+72.0	1.043478
+73.0	1.043478
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+78.0	1.043478
+79.0	1.043478
+80.0	1.043478
+81.0	1.043478
+82.0	1.043478
+83.0	1.043478
+84.0	1.043478
+85.0	1.043478
+86.0	1.043478
+87.0	1.043478
+88.0	1.043478
+89.0	1.043478
+90.0	1.043478
+91.0	1.043478
+92.0	1.043478
+93.0	1.043478
+94.0	1.043478
+95.0	1.043478
+96.0	1.043478
+97.0	1.043478
+98.0	1.043478
+99.0	1.043478
+100.0	1.043478
+