Mercurial > repos > gbcs-embl-heidelberg > je_demultiplex_illu

comparison je-demultiplex-illu.xml @ 7:370d9764f670 draft

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planemo upload for repository https://git.embl.de/grp-gbcs/Je/tree/master/src/galaxy commit e217faa15f73427979bb212036cb130a14c59750
author gbcs-embl-heidelberg
date Mon, 05 Mar 2018 07:13:47 -0500
parents 69c77f9fc064
children 9dad3d0b27bc
comparison
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6:c1a390032ed5 7:370d9764f670
93 <param name="BRED" value="false"/> 93 <param name="BRED" value="false"/>
94 <param name="MM" value="3"/> 94 <param name="MM" value="3"/>
95 <param name="MMD" value="2"/> 95 <param name="MMD" value="2"/>
96 <param name="Q" value="20"/> 96 <param name="Q" value="20"/>
97 <param name="DIAG" value="false"/> 97 <param name="DIAG" value="false"/>
98 <output name="METRICS_FILE_NAME" file="illu_summary_PE.txt" ftype="tabular" lines_diff="4"> 98 <output name="METRICS_FILE_NAME" file="illu_summary_PE.txt" ftype="tabular" lines_diff="4"/>
99 <output name="DEMULTIPLEX_RESULTS" ftype="tabular">
99 <discovered_dataset designation="unassigned_1" file="illu_unassigned_1_PE.txt" /> 100 <discovered_dataset designation="unassigned_1" file="illu_unassigned_1_PE.txt" />
100 <discovered_dataset designation="unassigned_2" file="illu_unassigned_2_PE.txt" /> 101 <discovered_dataset designation="unassigned_2" file="illu_unassigned_2_PE.txt" />
101 <discovered_dataset designation="emb681m5_GGACTCCTCTCTCTAT_2" file="emb681m5_GGACTCCTCTCTCTAT_2.txt"/> 102 <discovered_dataset designation="emb681m5_GGACTCCTCTCTCTAT_2" file="emb681m5_GGACTCCTCTCTCTAT_2.txt"/>
102 <discovered_dataset designation="emb681m5_GGACTCCTCTCTCTAT_1" file="emb681m5_GGACTCCTCTCTCTAT_1.txt"/> 103 <discovered_dataset designation="emb681m5_GGACTCCTCTCTCTAT_1" file="emb681m5_GGACTCCTCTCTCTAT_1.txt"/>
103 <discovered_dataset designation="emb681m4_TCCTGAGCCTCTCTAT_2" file="emb681m4_TCCTGAGCCTCTCTAT_2.txt"/> 104 <discovered_dataset designation="emb681m4_TCCTGAGCCTCTCTAT_2" file="emb681m4_TCCTGAGCCTCTCTAT_2.txt"/>
121 Input files are fastq files, and can be in gzip compressed format. 122 Input files are fastq files, and can be in gzip compressed format.
122 123
123 Author: Charles Girardot (charles.girardot@embl.de). 124 Author: Charles Girardot (charles.girardot@embl.de).
124 125
125 Wrapper by: Jelle Scholtalbers (jelle.scholtalbers@embl.de). 126 Wrapper by: Jelle Scholtalbers (jelle.scholtalbers@embl.de).
127
128 With contributions by: Mehmet Tekman (@mtekman)
126 129
127 ------ 130 ------
128 131
129 **Know what you are doing** 132 **Know what you are doing**
130 133