Mercurial > repos > gdroc > scaffremodler

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[up] drwxr-xr-x
dir. test-data/ drwxr-xr-x
dir. tool-data/ drwxr-xr-x
file 1_create_conf.py 9324 -rwxr-xr-x
file 1_create_conf.xml 7394 -rw-r--r--
file 2_map.py 12426 -rwxr-xr-x
file 2_map.xml 1533 -rw-r--r--
file 3_filter_single_pair.py 6820 -rwxr-xr-x
file 3_filter_single_pair.xml 2688 -rw-r--r--
file 4_filter_sam.py 5852 -rwxr-xr-x
file 4_filter_sam.xml 1660 -rw-r--r--
file 5_calc_stat.py 8616 -rwxr-xr-x
file 5_calc_stat.xml 2232 -rw-r--r--
file 6_parse_discord.py 35832 -rwxr-xr-x
file 6_parse_discord.xml 5135 -rw-r--r--
file 7_select_on_cov.py 57305 -rwxr-xr-x
file 7_select_on_cov.xml 3406 -rw-r--r--
file 8_ident_SV.py 38108 -rwxr-xr-x
file 8_ident_SV.xml 2875 -rw-r--r--
file README.md 39515 -rw-r--r--
file SplitOnX.py 2840 -rwxr-xr-x
file SplitOnX.xml 1090 -rw-r--r--
file bamgrepreads 22784 -rwxr-xr-x
file conf4circos.py 40976 -rwxr-xr-x
file conf4circos.xml 12400 -rw-r--r--
file contig_scaff.py 4931 -rwxr-xr-x
file contig_scaff.xml 1324 -rw-r--r--
file contig_scaff_withN.py 5517 -rwxr-xr-x
file convert2X.py 3070 -rwxr-xr-x
file convert2X.xml 2444 -rw-r--r--
file draw_circos.py 49027 -rwxr-xr-x
file draw_circos.xml 5696 -rw-r--r--
file estimate.py 14510 -rwxr-xr-x
file fusion_scaff.py 12940 -rwxr-xr-x
file fusion_scaff.xml 1351 -rw-r--r--
file group4contig.py 11705 -rwxr-xr-x
file group4contig.xml 1159 -rw-r--r--
file include_scaffremodler.sh 202 -rwxr-xr-x
file loca_programs.conf 432 -rw-r--r--
file look4fusion.py 18994 -rwxr-xr-x
file look4fusion.xml 1113 -rw-r--r--
file merge_sam.py 21122 -rwxr-xr-x
file reEstimateN.py 11586 -rwxr-xr-x
file reEstimateN.xml 1297 -rw-r--r--
file scaffremodler_wrapper.py 19379 -rwxr-xr-x
file shmwriter.c 884 -rw-r--r--
file tool_data_table_conf.xml.sample 225 -rw-r--r--
file tool_dependencies.xml 850 -rw-r--r--
file verif_fusion.py 6210 -rwxr-xr-x
file verif_fusion.xml 1230 -rw-r--r--