annotate readme.rst @ 23:a718420c834e draft

Added (default) option to collapse repetitive BED files.
author geert-vandeweyer
date Thu, 12 Feb 2015 08:51:06 -0500
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1 Panel Resequencing Report: This wrapper was created by Geert Vandeweyer. It is free to use, adapt and redistribute, but please mention the original source.
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4 Installation: The recommended installation is by means of the toolshed_.
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6 .. _toolshed: http://toolshed.g2.bx.psu.edu/view/geert-vandeweyer/coverage_report
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8 Samtools, bedtools and R should be installed automatically by galaxy if not yet available.
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9 PdfLatex must be installed manually and added to the PATH.
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12 History:
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14 0.0.1 - Initial release, no dependency handling
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15 0.0.2 - Updated release, following toolshed recommendations.
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16 0.0.3 - Upgraded to R 3.0.3 (support on headless machines). Update to the documentation(targets bed format).
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