Mercurial > repos > geert-vandeweyer > dc_genotyper

comparison DC_Genotyper.xml @ 22:ffebbccb694a draft default tip

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updated tool_threading dependencies
author geert-vandeweyer
date Thu, 07 Jan 2016 05:10:19 -0500
parents 8938f339ed37
children
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21:36e1ba3b4d1b 22:ffebbccb694a
3 <requirements> 3 <requirements>
4 <requirement type='package' version='3.0.2'>R_3_0_2</requirement> 4 <requirement type='package' version='3.0.2'>R_3_0_2</requirement>
5 <requirement type='package' version='0.1.19'>samtools</requirement> 5 <requirement type='package' version='0.1.19'>samtools</requirement>
6 <requirement type='package' version='0.2.6'>tabix</requirement> 6 <requirement type='package' version='0.2.6'>tabix</requirement>
7 <requirement type='package' version='latest'>blat_server</requirement> 7 <requirement type='package' version='latest'>blat_server</requirement>
8 <requirement type='package' version='1.92'>perl_module_threads</requirement> 8 <requirement type='package' version='2.02'>perl_module_threads</requirement>
9 <requirement type='package' version='1.46'>perl_module_threads_shared</requirement> 9 <requirement type='package' version='1.48'>perl_module_threads_shared</requirement>
10 <requirement type='package' version='3.02'>perl_module_Thread_Queue</requirement> 10 <requirement type='package' version='3.07'>perl_module_Thread_Queue</requirement>
11 <requirement type='package' version='2.3.32'>igvtools</requirement> 11 <requirement type='package' version='2.3.32'>igvtools</requirement>
12 </requirements> 12 </requirements>
13 <command interpreter="perl">DC_Genotyper.pl 13 <command interpreter="perl">DC_Genotyper.pl
14 -t "$targets" 14 -t "$targets"
15 -b "$bamfile" 15 -b "$bamfile"